Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1020 ATGAGATCTAATACCAATATCTTGTTTTCTCTTATTATTGCATCTTTGATTGTAATTACTGGTTCGAAAGCTTCATCGGGTTTAGATTCTTTTGTCATTTCTTGTGGCCTTCCCTCTAATGTGGGCATGGATAACCACGGACGAAGGTGGCGATCGGATTATAGATTCCTGACGTCTTCCACTAACACAATAAACTCAACAGCACAATACAAAGACCCTTCTCTTCCTTCACAAATTCCTTACATGTCTGCGAGAATCTTCACTTCCCCAACCACATACAAATTTCCTGTCTCTTCTGAATCTCGGCACTGGCTTCGACTCCATTTTTACCCCTCAGAATATAGCAGCCTTGATCCCTCCGATGCTTATTTTGCGGTTTATGCAAATGATGTCACTCTCCTCCACAATTTCAGTTCTTTCATTGCAGCGCAAGCTTTAACGCAAGCCTATTTCATCAAAGAATACTCTCTCCTGCCAATCCAATCTGGTGAACTGAACATCACCTTCACACCATCTTTAAGCCACCATGGATCATATGCTTTTGTTAATGGGATTGAGATAGTGCCTATGCCTGAGATTTTCAAGCCTGCTAAGTTGGTTTCCACTGACCGGTTTATTGATGTCGGGAACAGGCCGTTGCAGACAATGTTTCGTTTGAACGTTGGAGGAAATTTCATAGAACCCAAAGAAGACTCTGGTCATTTGAGCAGGACATGGTATAGTGATACCCCCTATTTGCTTGGAGCAAGAAGTGGGGTCACTTCCGGTGCTGATGAGAATGTGACGATTCAATACCCTTCTGAAATGTCTCGCTCCATTGCCCCTTTGGATGTTTATAGCTTTGCAAGAACCATGGGTCCAAATGCAAGTGTCGACCAGAACTACAATCTCACTTGGGTGTTTCAGGTTGATCCAAAATTTACCTATATTGTGAGGCTTCATTTCTGTGAGTTGGAGTTAGACAAGATTAACCAAAGGGTGTTTGATATTTATGTTAATAATCAAACAGCACAAGAAGCTGCTGATGTTTTAGCATGGACACGTTCTAAAGGGGTTCCCACTTACAAAGACTATGCAATTTATGTCACCAATGGACCTGGTGACGAAGAATTATGGGTCGCTTTACAACCTTCTGTTTCAAAGAAACCAGAATACTATGATGCTATTCTTAATGGATTAGAGATTTTTAAGGTTAGTTCCGATGATAGAAATTTAGCTGGGCACAATCCGACACCATCGGATATGCTTCTTGAAGATGAAGCTAGAAAGAAATTTAGCCCTTCAGAGGCCAATCATGCTCCAATCATAGGAGGGGTTGCTGGAGGAGCTGTTGGGGTTGCTGTTGCTGTTGCTATATGCTTTGTTGCCTATAAGAAGAGGAAACAAGATCGTGGGAGTGATTCAATTGCTAGGAGTTGGTTGCCCATATATTGGAATTCACAAACAACAGCTAGCAAATCAACTTTCTCTGCTGTTAGCAGTACTCTTTCATCATTAAGACAGGGGTTGTGCAGACACTTTTCATTACAGGAGGTCAAGTATGCTACCAAGAGCTTCAACGAATCACAGGTTATCGGTGTTGGTGGGTTTGGGAAAGTCTATAAAGGTGTCATAGATGGAGGGACCAATGTGGCTATAAAGAGATCAAACCCCACTTCTAAGCAAGGAGTTTTGGAGTTTCAGACTGAAGTTGAATTGCTTTCAAAGCTAAGGCATAAACACTTGGTCTCTCTAATTGGATTTTGTGAAGAAAATGGTGAAATGATCATAGTTTATGATTACATGGCCAATGGAACTCTAAGAGAACACCTATACAAAAGCAACAAACCAGCTTTACCATGGAAGCAGAGGCTTAAAATCTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGTGCCCAATTCATCATCATTCACAGGGATGTGAAAACCACAAATATACTATTAGATGATAAATGGGTAGCAAAGGTATCAGATTTTGGGCTGTCCAAAACAGGTCCTGATTTGCACCAAAACCATGTAACGACAATTGTGAAAGGTAGCTTTGGATACTTAGATCCTGAGTACTTCAGGAGGCAGCAACTCACAGCAAAATCAGATGTGTACTCTTTTGGGGTGGTTCTTTTTGAAGTGATTTGTGCAAGGCCTGCGCTAGATCCTAACTTGCCTAAAGAACAAGTGAGCCTAGCAGATTGGGCTTTAATGTGTCAAAGGGAGGGGAATTTGGAGAGCATCATTGATCCAGAACTTAGAGGTGAAACCAACCCTGAGTGTTTAAAGAAATTTGTGGAGACTGCCCTCAAGTGTATAGCTGACCATGGGCCTGAAAGGCCATCAATGGGTGATGTGTTGTGGAACCTTGAATTTGCACTTCAGTTGCAGGAGAACCCAAGTGGAGGGGAACATGCAGCAGAAGAGAAGGCTAATGATGCTTATGTTAAGCATAATGCTGTGGCTATTTTGAACGTTGGAGAGGGGAGTACAAATGCAACAACTAACGAGATGAATGATTCCAGTGTAGTTTTTTCACAATTTTTTCAGCAAAAAGGAAGATAA 2562 0.4184 MRSNTNILFSLIIASLIVITGSKASSGLDSFVISCGLPSNVGMDNHGRRWRSDYRFLTSSTNTINSTAQYKDPSLPSQIPYMSARIFTSPTTYKFPVSSESRHWLRLHFYPSEYSSLDPSDAYFAVYANDVTLLHNFSSFIAAQALTQAYFIKEYSLLPIQSGELNITFTPSLSHHGSYAFVNGIEIVPMPEIFKPAKLVSTDRFIDVGNRPLQTMFRLNVGGNFIEPKEDSGHLSRTWYSDTPYLLGARSGVTSGADENVTIQYPSEMSRSIAPLDVYSFARTMGPNASVDQNYNLTWVFQVDPKFTYIVRLHFCELELDKINQRVFDIYVNNQTAQEAADVLAWTRSKGVPTYKDYAIYVTNGPGDEELWVALQPSVSKKPEYYDAILNGLEIFKVSSDDRNLAGHNPTPSDMLLEDEARKKFSPSEANHAPIIGGVAGGAVGVAVAVAICFVAYKKRKQDRGSDSIARSWLPIYWNSQTTASKSTFSAVSSTLSSLRQGLCRHFSLQEVKYATKSFNESQVIGVGGFGKVYKGVIDGGTNVAIKRSNPTSKQGVLEFQTEVELLSKLRHKHLVSLIGFCEENGEMIIVYDYMANGTLREHLYKSNKPALPWKQRLKICIGAARGLHYLHTGAQFIIIHRDVKTTNILLDDKWVAKVSDFGLSKTGPDLHQNHVTTIVKGSFGYLDPEYFRRQQLTAKSDVYSFGVVLFEVICARPALDPNLPKEQVSLADWALMCQREGNLESIIDPELRGETNPECLKKFVETALKCIADHGPERPSMGDVLWNLEFALQLQENPSGGEHAAEEKANDAYVKHNAVAILNVGEGSTNATTNEMNDSSVVFSQFFQQKGR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1020 853 CDD STKc_IRAK 525 790 - -
Prci4g1020 853 Pfam Protein tyrosine and serine/threonine kinase 522 786 IPR001245 GO:0004672|GO:0006468
Prci4g1020 853 SMART serkin_6 519 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1020 853 FunFam FERONIA receptor-like kinase 30 191 - -
Prci4g1020 853 PANTHER OS03G0124300 PROTEIN-RELATED 8 468 IPR046957 GO:0004672
Prci4g1020 853 FunFam Receptor-like protein kinase FERONIA 595 811 - -
Prci4g1020 853 Gene3D Transferase(Phosphotransferase) domain 1 595 816 - -
Prci4g1020 853 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Prci4g1020 853 Gene3D - 213 401 - -
Prci4g1020 853 Gene3D - 30 190 - -
Prci4g1020 853 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Prci4g1020 853 FunFam FERONIA receptor-like kinase 211 399 - -
Prci4g1020 853 FunFam receptor-like protein kinase FERONIA 480 594 - -
Prci4g1020 853 Pfam Malectin-like domain 33 398 IPR024788 -
Prci4g1020 853 SUPERFAMILY Protein kinase-like (PK-like) 495 792 IPR011009 -
Prci4g1020 853 ProSiteProfiles Protein kinase domain profile. 519 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1020 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1020 Prci-Chr4 7764020 7766863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1020 29 853 Receptor kinase-like Gene Family AT3G51550 53.571 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci4g1020 Malectin_like 7.6e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1020 - - qsa:O6P43_003675 1108.2