Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1011 ATGGGAACTCCACCACCAGAAGAGCTTCTCAAGAAGATCGAGGACCTCGAGGCGGGTCACGCTCATCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCGAGCGATGCCCGAGCCGAGCAGAGCCATCATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTGCGTCCAGGAGGAGAGCTGGAGGCGGCGGATTCGATGGACCTGCTTCGTGGAAGAAAGGTTCAACTTCGTTTAAACATTCGTCACCGCTTCAGAGAGAGAGCCGTAGCAGTGATCCTCAGAATGATGGAGAAGTTGGCGTTGGAAGGGGCCCTTCAGCTGTGAATTTTACTGATAGGCAGTATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCATATATTGGATCTTAACGGTCGTATGATATACTGGAACCGTAGTGCTGAAAATTTATACGGTTATACAGCGGAAGAAGCCCTCGGTAAGGATGGCATTGAACTGCTTGTAGACCCCAGGGATTTTGCCGTAGCCAATGATATAGTCAACCGGGTCATTAAGGGAGAGAAATGGATTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTCGCTTTAGCTAGTAATACCCCTTTATATGACGATGATGGAAATTTGGCTGGCGTTATTTCGGTCTCGAGTGATTCACGCCCCTTCCTTGACACGAGAGTTCCGTTATCAGGAGTAAAGCACTCTGAAACAGGTTCAGGCTCCAGCAATCTTAAAAGTGGCATCACAAATAAACTTGGTCTGGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTTCTAATTTGGCATCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAATGGGAGAAAATGTGGATCGTGAAGGTGGGAGCGGTGAAAGTCATCATTCTGAGCATAGCTTCTCAGATTCTGTTCTCTCAGACCAGAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCATCTCCTTTTGGTCTATTTTCTCACAAAGAAGACAAAAGTCAAGGAAAAAATTTAAAAGATTACGGTGATGAGGGTGAAGGAAAACCTAGTCATAAAGTATTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAAAACAATATCATGGCCATGGAAAGCATATGAACGGGATGGGTCAGAGGGAAGGAATGTCCGTGTTGGTTGGCCCTGGGTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGAAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGAGGTCGACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCAGTCAATAATAAATTGGACATGGATACCGATTGTTTGGATTATGAAATCTTGTGGGAAGACTTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCACGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATACTCAGATGATGTAATAATGTCCTTCAGACAAGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTTTTCATGGGGGCGGTAACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCCCGTGGAAGCTTGTTTCGCTTACTTCAGAGAAACACATCCAAACTTGACTGGAGACGACGTGTTCATATGGCTTTAGACATTGCACGGGGTGTAAACTATCTTCATCATTGCAGCCCACCTATCATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAGGAACTGGACTGTTAAGGTTGGTGATTTTGGCCTTTCGCGCCTAAAGCATGAAACTTATCTCACGACAAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCTTCTGATGAGAAGTCTGATGTATACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTAATTGGAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCGAAGGATGTTGATCCTACGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCTGGTCGGCCAACATTTCAGGAACTGCTAGAAAGGCTGAGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCAGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAATCCTAA 2316 0.4594 MGTPPPEELLKKIEDLEAGHAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGASRRRAGGGGFDGPASWKKGSTSFKHSSPLQRESRSSDPQNDGEVGVGRGPSAVNFTDRQYLNILQSMGHSVHILDLNGRMIYWNRSAENLYGYTAEEALGKDGIELLVDPRDFAVANDIVNRVIKGEKWIGQFPAKNKMGEKFFALASNTPLYDDDGNLAGVISVSSDSRPFLDTRVPLSGVKHSETGSGSSNLKSGITNKLGLDSQQPLQVGIASKISNLASKVSNKVKSRIRMGENVDREGGSGESHHSEHSFSDSVLSDQREDANSSGASTPRGDVPPSPFGLFSHKEDKSQGKNLKDYGDEGEGKPSHKVLTSKAEAWIQKKTISWPWKAYERDGSEGRNVRVGWPWVQNDQENEPAQRKPLSSCVRPESQAGEGGRPVNNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPTWAAIIESCWHSDPAGRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1011 771 FunFam PAS domain-containing protein tyrosine kinase family protein 571 762 - -
Prci4g1011 771 Coils Coil 13 33 - -
Prci4g1011 771 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Prci4g1011 771 MobiDBLite consensus disorder prediction 414 451 - -
Prci4g1011 771 CDD STKc_MAP3K-like 499 745 - -
Prci4g1011 771 PRINTS Tyrosine kinase catalytic domain signature 672 694 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 PRINTS Tyrosine kinase catalytic domain signature 567 580 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 PRINTS Tyrosine kinase catalytic domain signature 716 738 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 PRINTS Tyrosine kinase catalytic domain signature 606 624 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 PRINTS Tyrosine kinase catalytic domain signature 653 663 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 MobiDBLite consensus disorder prediction 291 321 - -
Prci4g1011 771 Pfam Protein tyrosine and serine/threonine kinase 493 745 IPR001245 GO:0004672|GO:0006468
Prci4g1011 771 Pfam PAS domain 132 229 IPR000014 -
Prci4g1011 771 Gene3D Transferase(Phosphotransferase) domain 1 571 771 - -
Prci4g1011 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Prci4g1011 771 SMART serkin_6 493 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1011 771 FunFam PAS domain-containing protein tyrosine kinase 486 570 - -
Prci4g1011 771 MobiDBLite consensus disorder prediction 15 112 - -
Prci4g1011 771 MobiDBLite consensus disorder prediction 80 96 - -
Prci4g1011 771 MobiDBLite consensus disorder prediction 288 374 - -
Prci4g1011 771 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Prci4g1011 771 Gene3D PAS domain 130 232 - -
Prci4g1011 771 MobiDBLite consensus disorder prediction 322 337 - -
Prci4g1011 771 SUPERFAMILY Protein kinase-like (PK-like) 481 745 IPR011009 -
Prci4g1011 771 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Prci4g1011 771 SMART pas_2 119 186 IPR000014 -
Prci4g1011 771 CDD PAS 132 229 IPR000014 -
Prci4g1011 771 ProSiteProfiles Protein kinase domain profile. 493 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1011 771 Gene3D Phosphorylase Kinase; domain 1 486 570 - -
Prci4g1011 771 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 751 - -
Prci4g1011 771 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1011 Prci-Chr4 7703860 7711700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1011 1 767 MAP Kinase Kinase Kinase AT3G06620 62.087 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci4g1011 PK_Tyr_Ser-Thr 8.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1011 - - qsa:O6P43_021865 1140.56