Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1010 ATGGGAACTCCACCACCAGAAGAGCTTCTCAAGAAGATCGAGGACCTCGAGGCGGGTCACGCTCATCTCAAGCAAGAAATGTCCAAGCTCAAGCTCTCGGGCGCGAGCGATGCCCGAGCCGAGCAGAGCCATCATCGCCAGAGGTCGCACTCGATATCGCCGCAGCGTTCGAGATTGGGTGCGTCCAGGAGGAGAGCTGGAGGCGGCGGATTCGATGGACCTGCTTCGTGGAAGAAAGGTTCAACTTCGTTTAAACATTCGTCACCGCTTCAGAGAGAGAGCCGTAGCAGTGATCCTCAGAATGATGGAGAAGTTGGCGTTGGAAGGGGCCCTTCAGCTGTGAATTTTACTGATAGGCAGTATCTCAATATTTTGCAGTCAATGGGGCACTCTGTTCATATATTGGATCTTAACGGTCGTATGATATACTGGAACCGTAGTGCTGAAAATTTATACGGTTATACAGCGGAAGAAGCCCTCGGTAAGGATGGCATTGAACTGCTTGTAGACCCCAGGGATTTTGCCGTAGCCAATGATATAGTCAACCGGGTCATTAAGGGAGAGAAATGGATTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAGAAGTTTTTCGCTTTAGCTAGTAATACCCCTTTATATGACGATGATGGAAATTTGGCTGGCGTTATTTCGGTCTCGAGTGATTCACGCCCCTTCCTTGACACGAGAGTTCCGTTATCAGGAGTAAAGCACTCTGAAACAGGTTCAGGCTCCAGCAATCTTAAAAGTGGCATCACAAATAAACTTGGTCTGGATTCTCAACAGCCTCTTCAAGTTGGTATAGCATCAAAAATTTCTAATTTGGCATCCAAGGTAAGTAACAAAGTGAAGTCAAGAATCCGAATGGGAGAAAATGTGGATCGTGAAGGTGGGAGCGGTGAAAGTCATCATTCTGAGCATAGCTTCTCAGATTCTGTTCTCTCAGACCAGAGAGAAGATGCTAATTCAAGTGGAGCTAGCACACCCAGGGGAGATGTGCCCCCATCTCCTTTTGGTCTATTTTCTCACAAAGAAGACAAAAGTCAAGGAAAAAATTTAAAAGATTACGGTGATGAGGGTGAAGGAAAACCTAGTCATAAAGTATTAACTTCCAAGGCTGAAGCATGGATTCAAAAGAAAACAATATCATGGCCATGGAAAGCATATGAACGGGATGGGTCAGAGGGAAGGAATGTCCGTGTTGGTTGGCCCTGGGTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGAAAGCCTCTTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGAGGTCGACCTGTTAATAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCAGTCAATAATAAATTGGACATGGATACCGATTGTTTGGATTATGAAATCTTGTGGGAAGACTTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCACGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATACTCAGATGATGTAATAATGTCCTTCAGACAAGAGGTATCTGTTATGAAAAGACTTAGACATCCAAATGTCCTTCTTTTCATGGGGGCGGTAACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCCCGTGGAAGCTTGTTTCGCTTACTTCAGAGAAACACATCCAAACTTGACTGGAGACGACGTGTTCATATGGCTTTAGACATTGCACGGGGTGTAAACTATCTTCATCATTGCAGCCCACCTATCATTCATCGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAGGAACTGGACTGTTAAGGTTGGTGATTTTGGCCTTTCGCGCCTAAAGCATGAAACTTATCTCACGACAAAGACAGGAAAGGGCACGGTGGGTTCACATATCTTCTTTCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCTTCTGATGAGAAGTCTGATGTATACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTAATTGGAGCTGTTGGGTTCATGAACCAGCGGCTAGAAATTCCGAAGGATGTTGATCCTACGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCTGGTCGGCCAACATTTCAGGAACTGCTAGAAAGGCTGAGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCAGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAATCCTAA 2337 0.4587 MGTPPPEELLKKIEDLEAGHAHLKQEMSKLKLSGASDARAEQSHHRQRSHSISPQRSRLGASRRRAGGGGFDGPASWKKGSTSFKHSSPLQRESRSSDPQNDGEVGVGRGPSAVNFTDRQYLNILQSMGHSVHILDLNGRMIYWNRSAENLYGYTAEEALGKDGIELLVDPRDFAVANDIVNRVIKGEKWIGQFPAKNKMGEKFFALASNTPLYDDDGNLAGVISVSSDSRPFLDTRVPLSGVKHSETGSGSSNLKSGITNKLGLDSQQPLQVGIASKISNLASKVSNKVKSRIRMGENVDREGGSGESHHSEHSFSDSVLSDQREDANSSGASTPRGDVPPSPFGLFSHKEDKSQGKNLKDYGDEGEGKPSHKVLTSKAEAWIQKKTISWPWKAYERDGSEGRNVRVGWPWVQNDQENEPAQRKPLSSCVRPESQAGEGGRPVNNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHETYLTTKTGKGTVGSHIFFPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPTWAAIIESCWHSDPAGRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1010 778 Coils Coil 13 33 - -
Prci4g1010 778 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Prci4g1010 778 MobiDBLite consensus disorder prediction 414 451 - -
Prci4g1010 778 MobiDBLite consensus disorder prediction 291 321 - -
Prci4g1010 778 NCBIfam PAS domain S-box protein 119 229 IPR000014 -
Prci4g1010 778 SMART serkin_6 493 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1010 778 Gene3D PAS domain 130 232 - -
Prci4g1010 778 Pfam Protein tyrosine and serine/threonine kinase 493 752 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Prci4g1010 778 Gene3D Phosphorylase Kinase; domain 1 486 570 - -
Prci4g1010 778 FunFam PAS domain-containing protein tyrosine kinase 486 570 - -
Prci4g1010 778 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 226 IPR035965 -
Prci4g1010 778 MobiDBLite consensus disorder prediction 15 112 - -
Prci4g1010 778 MobiDBLite consensus disorder prediction 80 96 - -
Prci4g1010 778 PRINTS Tyrosine kinase catalytic domain signature 606 624 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 PRINTS Tyrosine kinase catalytic domain signature 723 745 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 PRINTS Tyrosine kinase catalytic domain signature 660 670 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 PRINTS Tyrosine kinase catalytic domain signature 679 701 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 PRINTS Tyrosine kinase catalytic domain signature 567 580 IPR001245 GO:0004672|GO:0006468
Prci4g1010 778 MobiDBLite consensus disorder prediction 288 374 - -
Prci4g1010 778 ProSiteProfiles Protein kinase domain profile. 493 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1010 778 MobiDBLite consensus disorder prediction 322 337 - -
Prci4g1010 778 Gene3D Transferase(Phosphotransferase) domain 1 571 778 - -
Prci4g1010 778 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 758 - -
Prci4g1010 778 SMART pas_2 119 186 IPR000014 -
Prci4g1010 778 CDD PAS 132 229 IPR000014 -
Prci4g1010 778 SUPERFAMILY Protein kinase-like (PK-like) 481 752 IPR011009 -
Prci4g1010 778 CDD STKc_MAP3K-like 499 752 - -
Prci4g1010 778 MobiDBLite consensus disorder prediction 351 374 - -
Prci4g1010 778 FunFam PAS domain-containing protein tyrosine kinase family protein 571 769 - -
Prci4g1010 778 Pfam PAS domain 132 229 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1010 Prci-Chr4 7703860 7711703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1010 1 774 MAP Kinase Kinase Kinase AT3G06620 61.538 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci4g1010 PK_Tyr_Ser-Thr 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1010 - - qsa:O6P43_021865 1133.63