Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g1004 ATGGAGGACAGACTAGTAAACACAGTCTCTGTAATATCAGTGATTGCTCTGATCACATTCGTCGTCATCGCTCGCTGCTTCTTAAAGCGTTCAAGAGTCTTCTTTCTCATCTTGGGGGCCGATGTTACGTTGATCATCGCAGTCTTCGCCTGCGTTCTAATCCGATTGCGATACAACCGCAGAAGAAGACTGATAGAATCCCGATATAAATCTGAAGGTAGAGAGCTCCGAATAGAGTACAGCTTCCTGCGAAAAGTCGCCGGCGTTCCGACCAAGTTCCGATTCCAAGAGCTCGAAGACGCCACCAACAGATTCCAGTCGCTACTCGGCCAAGGAGCCTCAGCTTCAGTCTTCAAAGGTATTTTAAACGACGGCACCACGGTAGCCGTCAAGCGAATCAACGGCGAAGAACGAGGCGAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGCGTCCAGCATGTCAACCTCGTGCGCCTGATTGGGTACTTTAATTCCACCACAGCCCCTCGGTACTTGGTTTACGAGTTCATCCCAAACGGATCTCTGGATTCCTGGATATTCCCCTTTAAAACCGAGAATCGAAGATCTCGCCGGGGGTTTTTATCGTGGAGCTTGAGATACAGAGTAGCGATCGATGTAGCCAAAGCTCTCTCTTACCTCCACGATGATTGCAGATCGACAATCCTACACCTGGATGTAAAACCAGAGAACATTCTGCTGGACGAGAATTTCAAAGCAGTGGTCTCAGACTTCGGTCTGTCGAAGCTAATGGGGAAAGATGAGAGCGAAGTGATGACAACAGTGAGAGGAACAAGAGGGTATTTAGCTCCAGAATGGCTGTTAGAACACGGAGTTTCAGAGAAAACAGACATATACAGTTACGGCATGGTACTGCTGGAGATAATAGGGGGAAGAAGAAACGTGTGCGTAATCCAAGATCCAAGGGACAGGGCAAAGAAGAAGTGGGATTACTTTCCAAAGACTGTGAACGAGAAAGTGAGAGAAGGAAAACCCATGGAGATAGTGGATCAGACGTTGATTGACAGTGGGGGCGTGGAAGAGAGAGAAGTGAAGAGGATGGTGTACGTGGCACTGTGGTGCATACAAGAGAGGCCGAGGGTGAGACCAAGCATGAAGCAAGTGGTGGAGATGCTTGAAGCGAGAGCGAAGGTGGAGGAGCCACCTGATACGAGGATGGTTACGGCCAATTTCCTTTCAGTAGGAGAAGAAGGAGAAGCAGAAAGCTGCTCGAATGGCACCACATTGGCTGATTATGTGGCGAGCCAGAGGGCAATAGGAAATTCGGGTTACTATGGATCCACCTACTCCATGGCCACCACAGTTCTATCTGGCAGATAG 1365 0.493 MEDRLVNTVSVISVIALITFVVIARCFLKRSRVFFLILGADVTLIIAVFACVLIRLRYNRRRRLIESRYKSEGRELRIEYSFLRKVAGVPTKFRFQELEDATNRFQSLLGQGASASVFKGILNDGTTVAVKRINGEERGEKEFKSEVAAIASVQHVNLVRLIGYFNSTTAPRYLVYEFIPNGSLDSWIFPFKTENRRSRRGFLSWSLRYRVAIDVAKALSYLHDDCRSTILHLDVKPENILLDENFKAVVSDFGLSKLMGKDESEVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIIGGRRNVCVIQDPRDRAKKKWDYFPKTVNEKVREGKPMEIVDQTLIDSGGVEEREVKRMVYVALWCIQERPRVRPSMKQVVEMLEARAKVEEPPDTRMVTANFLSVGEEGEAESCSNGTTLADYVASQRAIGNSGYYGSTYSMATTVLSGR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g1004 454 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1004 454 FunFam Putative receptor-like protein kinase 179 395 - -
Prci4g1004 454 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Prci4g1004 454 SUPERFAMILY Protein kinase-like (PK-like) 86 388 IPR011009 -
Prci4g1004 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Prci4g1004 454 Gene3D Transferase(Phosphotransferase) domain 1 179 405 - -
Prci4g1004 454 FunFam Putative receptor-like protein kinase 70 178 - -
Prci4g1004 454 PANTHER OS07G0415500 PROTEIN 32 399 - -
Prci4g1004 454 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Prci4g1004 454 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g1004 454 Pfam Protein kinase domain 107 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g1004 Prci-Chr4 7654697 7656344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g1004 1 399 Receptor kinase-like Gene Family AT5G20050 63.591 1.59e-177 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g1004 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g1004 - - gmx:100779485 607.06