Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0993 ATGGATGAGAAGAGAGGGGAAGAAGAGAGCAGCGAGAAGTGGAGGATGGCAAACTTCGTGGCATTTACCGACGAGATTCCGACGATGAGTAGTTCCGGTCTGATGAGCTTTCCTCAACCTCCTGCTTTCTCAAGTATCTCCGACATGATGATGGTGCCTCTATCAGAGAACGATTACAAGCCCAGTTACTCCTCTGCCTTCATGGACTTGCTCAATCTCCAAGATTACAGTCCTTCTCTGTTCGATTGCCTCCCTTACTCCGCCACTGACCACCACACTCTTTCGTCGCCGGCAAGCTCCAACGTCCCCGAATCTTCCGAGGTCTTGAACACCACTCCGGCCTCCCCCAATTCTTCCTCTATCTCATCTTCCTCCAATGAAACTCCCCTCGCCGATCATACGGCCATCGACCAGCCCCACACTAGTAGTGCTAAACAAGAACCTGACGATGAAGAACCCGGAGATGCAGCCAAAGGAGACGACCTCGATCAACAAAAGACCAAGAAACAGCTGAAGCCAAAAAAGAAGAACCAAAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTCGATCAACTTGACGATGGCTATAGGTGGCGCAAGTATGGCCAAAAGGCCGTCAAAAACAGCCCCTATCCCAGGAGCTACTATCGTTGCACCACCCCAGGTTGCGGCGTGAAGAAGCGGGTGGAGCGGTCGTCCGACGACCCGTCGATCGTGGTGACGACGTACGAGGGCCAGCACACGCACCCGAGTCCGGTGATGAGCCGGGCAAGCCTGGGGTTCGGACCCACGAGGGCTAGTGGTGGTGTGCTTGGTTCGCCAACACAGTTTGTGGTGCCACGGGCACAGCATCAGCATCAGCATCATCATCAGGAACAAGAGCATGTGCAGGCACAAGAGGATGCTTTGTTGTATAATAGCTCACCCCCACTACTTCCTTTGAGTAGTATCAGCGATCCCACGACGTCATCTTCTAGCTTCCATCATCATCGTCTTCTAGGTTTTGGACCATCGTCGACCACGACAATGGCTTCTCAAGCCAATTTGTTAAGGGACAATGGGCTGCTTCAGGACATTGTTGTGTCAATGCAGATGAGAAAGGAGGAGAAAGAAGGGAAAGAAGAATAG 1143 0.5214 MDEKRGEEESSEKWRMANFVAFTDEIPTMSSSGLMSFPQPPAFSSISDMMMVPLSENDYKPSYSSAFMDLLNLQDYSPSLFDCLPYSATDHHTLSSPASSNVPESSEVLNTTPASPNSSSISSSSNETPLADHTAIDQPHTSSAKQEPDDEEPGDAAKGDDLDQQKTKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSDDPSIVVTTYEGQHTHPSPVMSRASLGFGPTRASGGVLGSPTQFVVPRAQHQHQHHHQEQEHVQAQEDALLYNSSPPLLPLSSISDPTTSSSSFHHHRLLGFGPSSTTTMASQANLLRDNGLLQDIVVSMQMRKEEKEGKEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0993 380 ProSiteProfiles WRKY domain profile. 192 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g0993 380 MobiDBLite consensus disorder prediction 92 142 - -
Prci4g0993 380 Pfam WRKY DNA -binding domain 198 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g0993 380 FunFam WRKY transcription factor 57 183 257 - -
Prci4g0993 380 Gene3D WRKY domain 181 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g0993 380 SMART WRKY_cls 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci4g0993 380 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci4g0993 380 MobiDBLite consensus disorder prediction 143 168 - -
Prci4g0993 380 MobiDBLite consensus disorder prediction 92 187 - -
Prci4g0993 380 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 299 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0993 Prci-Chr4 7511385 7513364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0993 167 373 WRKY Transcription Factor Family AT5G49520 52.632 7.65e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci4g0993 WRKY 2.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0993 - - gmx:100812252 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0993 4 7511385 7513364 Prci4g0993 4 7511385 7513364 ECH