Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0973 ATGATTAGCGATCCCATTATAGAGATGTCTTCTTCATCTAAGTTCATCCCAATTGTCCGATCTGGTAGCCATGCTGATATTGGACCGCGGGGATCTATGGATGATGAACACATTCAAATAGATGATCTGGCCTCCCATCTTGGACTTGTGTTCAAGTCTCCAATACCAAGTGCATTTTATGCAGTTTTTGACGGTCATGGTGGACCTGATGCAGCCTATTTTGTTAAGAGGAATGCTATGAGACTATTTTTTGAAGATTCTAACTTGCTTCTGTCATATGATACTGATGCTTTATTTCTGAAGAAATTGGAGGATTCCCATCGGAAAGCTTTCTTACGTGCAGACCTTGCCTTGGCTAACGAAGCAACTGTTAGTAGTAACTGTGGGACAACAGCATTGACTGCGCTTATACTTGGAAGTCATTTGCTGGTTGCAAATGCTGGTGATTGTCGAGCAGTTCTTTGCAAAAGAGGAGTGGCTGTTGACATGTCTCAAGATCATAGACCTAGTTACTTACCAGAAAAGAGAAGAGTGGAAGCGTCAGGTGGCTTCATTGATGATGGCTATCTCAATGGTTATCTGTCTGTGACCAGGGCCCTTGGGGATTGGGATTTAAAACCACTTGGTTCTGCTTCACCCCTTATTGCTGATCCAGATGTTCTACAGGTTTCATTGACTGAGAATGATGAGTTTTTGATCATTGGGTGTGATGGGCTTTGGGATGTCATGTCAAGTCAGGATGCTGTTAGTTTTGTCCGCCGGAGGTTAAGAAGGCATGATGATCCACAGCAATGTGCTAGAGAGCTAGTCAAGGAAGCACTGCGCTTGAATACATCAGATAATCTCACTGTGATTGTTATATGCTTGTCCTCCATTGAAAGCATAGTTGAATCATGTCCACCTCAGAGGCGAAGATTCAGAGCTTGCTGA 930 0.4333 MISDPIIEMSSSSKFIPIVRSGSHADIGPRGSMDDEHIQIDDLASHLGLVFKSPIPSAFYAVFDGHGGPDAAYFVKRNAMRLFFEDSNLLLSYDTDALFLKKLEDSHRKAFLRADLALANEATVSSNCGTTALTALILGSHLLVANAGDCRAVLCKRGVAVDMSQDHRPSYLPEKRRVEASGGFIDDGYLNGYLSVTRALGDWDLKPLGSASPLIADPDVLQVSLTENDEFLIIGCDGLWDVMSSQDAVSFVRRRLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSSIESIVESCPPQRRRFRAC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0973 309 ProSiteProfiles PPM-type phosphatase domain profile. 20 289 IPR001932 -
Prci4g0973 309 SMART PP2C_SIG_2 35 289 IPR001932 -
Prci4g0973 309 PANTHER PROTEIN PHOSPHATASE 2C 22 287 IPR015655 GO:0004722|GO:0006470
Prci4g0973 309 CDD PP2Cc 19 289 IPR001932 -
Prci4g0973 309 ProSitePatterns PPM-type phosphatase domain signature. 59 67 IPR000222 GO:0043169
Prci4g0973 309 SUPERFAMILY PP2C-like 3 290 IPR036457 -
Prci4g0973 309 FunFam Probable protein phosphatase 2C 22 6 292 - -
Prci4g0973 309 Pfam Protein phosphatase 2C 28 281 IPR001932 -
Prci4g0973 309 Gene3D - 1 294 IPR036457 -
Prci4g0973 309 SMART PP2C_4 10 287 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0973 Prci-Chr4 7242476 7244663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0973 11 309 PP2C-type Phosphatase Gene Family AT1G48040 64.570 1.35e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0973 K14803 - gmx:100798957 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0973 4 7242476 7244663 Prci4g0973 4 7242476 7244663 ECH