Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0953 ATGCAAGTAGCTGGATCTGGCCTCTCCCACATGAGAGGAACATCAGTATTTACTCGCATATTAAAAAATGATGGTATTCCTGGACTCTTTAGAGGTTTTGGTACTTCTGCTATTGGATCGATGCCTGGTCGGGTCTTGGCTCTAACATCACTTGAGTTGTCAAAAGACTTCATGTTAAAATATACTGAAGATTTTGACATGCCTGAAGCATCATGTATTGGCCTGGCAAATGGAGTGGCAGGCATGTTCTCAAATCTGGTATCTTGTGTATACTTTGTGCCTTTGGATGTGATCTGTCAGAGGCTAATGGTACAAGGTCTTCCTGGAACTACGTACTGCAGTGGGCCATTTGATATTGTCCGTAAAGTTGTGAAGACTGAGGGTTTTCGTGGCATTTATAGAGGCTTTGGATTAACTGCTGTAACCCAGTCACCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCTGCACAACACATCATTTGGAGGAGTTTAGGCTATAGAGATGCCATGGAGAAAAAACCTTCGCAAACAGAAATGGTGATTGTCCAGGCTACAGCAGGGATGGTAGCTGGTGCTTGTTCCTCTGTTATAACCACCCCCATAGATACTGTAAAAACAAGGCTTCAGGTTATGGACAACCATGGTGGTGGAAGACCATCAGTGCTGAAGACAACAAAGACACTTTTCAAGGAAGATGGATGGTGGGGTTTTTACCGGGGATTTGGACCTCGTTTTTTGAATATGTCACTCTATGGAACTACCATGATTGTTACATATGAACTGATAAAAAGATTATCCATACAAGACGGCCGAGTCTGA 822 0.4343 MQVAGSGLSHMRGTSVFTRILKNDGIPGLFRGFGTSAIGSMPGRVLALTSLELSKDFMLKYTEDFDMPEASCIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGTTYCSGPFDIVRKVVKTEGFRGIYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYRDAMEKKPSQTEMVIVQATAGMVAGACSSVITTPIDTVKTRLQVMDNHGGGRPSVLKTTKTLFKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSIQDGRV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0953 273 Gene3D Mitochondrial carrier domain 1 270 IPR023395 -
Prci4g0953 273 SUPERFAMILY Mitochondrial carrier 12 262 IPR023395 -
Prci4g0953 273 PRINTS Mitochondrial carrier protein signature 188 210 IPR002067 GO:0055085
Prci4g0953 273 PRINTS Mitochondrial carrier protein signature 87 105 IPR002067 GO:0055085
Prci4g0953 273 PRINTS Mitochondrial carrier protein signature 133 151 IPR002067 GO:0055085
Prci4g0953 273 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 270 - -
Prci4g0953 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 266 IPR018108 -
Prci4g0953 273 Pfam Mitochondrial carrier protein 14 61 IPR018108 -
Prci4g0953 273 Pfam Mitochondrial carrier protein 76 162 IPR018108 -
Prci4g0953 273 Pfam Mitochondrial carrier protein 181 268 IPR018108 -
Prci4g0953 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 160 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0953 Prci-Chr4 6924392 6927234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0953 1 270 Chloroplast and Mitochondria Gene Families AT5G15640 50.365 3.86e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0953 K15121 - qsa:O6P43_003724 485.723