Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0923 ATGGTGATCGTGAAGCTTGGGAACAAGAACGACAAGGAAAAGCAAGGACAGGGAATGCGACTTGGGAAATACGAGCTTGGTAGGACTTTAGGCGAAGGCAATTTCGGAAAGGTCAAATTAGCTAGGAATACCGATTCCGGCCTACCCTTCGCAGTTAAGATCCTCGAGAAGAGAAAGATCATTGACCTCAATATAACCAATCAGATTAAGAGGGAAATAGCCACCTTGAAGCTCTTAAAGCATCCGAACGTGGTCAGATTACACGAGGTCTTGGCTAGCAAAACCAAGATTTATATGGTCCTCGAGTGCGTGACTGGAGGAGAGTTGTTTGACAGAATTGCATCCAAGGGCAAACTTCCAGAAGCTGAAGGTAGGAAGCTTTTCCAGCAGTTGATTGATGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTCAAGCTGGAGAATGTACTTGTAGATGCCAAAGGGAACATAAAGATAACCGACTTTGGCCTTAGTGCTTTACCGCAGCATTTCAGAGCAGATGGTTTGCTGCATACCACCTGTGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGATGGTACAACATCAGATACATGGTCCTGTGGGGTCATATTGTATGTTATCTTAACAGGATATCTTCCTTTTGATGATAGAAATCTTGCAGTTCTCTACCAAAGGATTCTCAAAGGTGATGTTCAGATGCCAAAATGGCTATCGCCTGGTGCCAAAAACATGATCAAGAGGATTCTAGATCCCAATCCTTCCACTCGGATAACAATGTCTGGCATCAAACAAGATGAATGGTTCAAGCAGGACTATATTCCAGCAAAGCCAGAGGATGAGGAAGAGGACGTATATATTGACGATGAAGCCTTTTCCATCCACGAAGTGGCAGACGAAACAGAAGATAGGAGTCCAGGATCACCAACCCTTATCAACGCATTTCAATTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGACGTCTCTGAGAGGAAGATAAGATTTACATCCAACCTCTCCGCAAAAGACTTGGTTGAGAGGCTTGAGGACGTTGTGACAGAAATGGGGTTTACAGTTCAAAAGAAAAATGAAAAGGTGAAAGTGATACGAGAGAACAAGGGGCATAAAAGTTTAGGCAACCTTACAGTTGCAGCAGAGGTTTTTGAGATAAGCCCATCATTGTACGTAGTAGAGTTGAGGAAATCTTATGGAGATTCTTCTGTATATAGACAGTTGTGCGAGAAGTTGTCAAATGATTTGGGGGTTCCACCGAGAACCGGAGCGCTCGTAAGTGGATAG 1350 0.4385 MVIVKLGNKNDKEKQGQGMRLGKYELGRTLGEGNFGKVKLARNTDSGLPFAVKILEKRKIIDLNITNQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLECVTGGELFDRIASKGKLPEAEGRKLFQQLIDGVSYCHDKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYDGTTSDTWSCGVILYVILTGYLPFDDRNLAVLYQRILKGDVQMPKWLSPGAKNMIKRILDPNPSTRITMSGIKQDEWFKQDYIPAKPEDEEEDVYIDDEAFSIHEVADETEDRSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLVERLEDVVTEMGFTVQKKNEKVKVIRENKGHKSLGNLTVAAEVFEISPSLYVVELRKSYGDSSVYRQLCEKLSNDLGVPPRTGALVSG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0923 449 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0923 449 Pfam NAF domain 319 378 IPR004041 GO:0007165
Prci4g0923 449 Gene3D Transferase(Phosphotransferase) domain 1 16 320 - -
Prci4g0923 449 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Prci4g0923 449 FunFam Non-specific serine/threonine protein kinase 17 319 - -
Prci4g0923 449 CDD CIPK_C 323 434 - -
Prci4g0923 449 Gene3D Kinase associated domain 1, KA1 321 439 - -
Prci4g0923 449 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Prci4g0923 449 FunFam Non-specific serine/threonine protein kinase 319 440 - -
Prci4g0923 449 SUPERFAMILY Protein kinase-like (PK-like) 21 309 IPR011009 -
Prci4g0923 449 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Prci4g0923 449 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0923 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 422 - -
Prci4g0923 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Prci4g0923 449 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0923 Prci-Chr4 6736585 6741694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0923 87 438 CBL-interacting serine-threonine protein kinases AT3G17510 72.805 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci4g0923 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0923 K07198 - qsa:O6P43_003749 723.391