Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0914 ATGACAAGGGAGACAAGTTTAGGTGGAGATATTATCACTACATCTGAGACTAGAAGTTCAACAAGTAATCCTATTGGTGGAAGTCCTGAGAAAGTCCAGGGAGAGTCAGACAAGCATCAGGGTTCAAAGGAGATTAAGGAAAAAGATGAAACCACCAACACTGTACCTTTTTACAAGCTTTTCTCATTCGCAGATTCCTTGGATTATCTGTCGATGCTTGTGGGGACAGTTGGTGCTGTTGCAAATGGAATAGCTATGCCCTTAATGACTATATTTATGGGAAATGTAATTGATGCATATGGAAGATCCGCAGACACAAAACAAGTTGTCCATGAAGTTTCCAAGGTTTCTCTGAAGTTCGTATACTTGGCAGTTGGCTCCTTTCTTGTGTCATTTCTTCAGGTGACTTGCTGGATGGTCACTGGAGAGAGACAGGCTGCAAGAATAAGAGGTTTATACCTTAAGACAATTCTGAGGCAGGACATCAGTTTCTTTGATAAGGAAACTAACACCGGTGAGGTTGTTGGAAGGATGTCAGGGGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCATACAGTGTGTAGCAACTTTTTTTGGAGGTTTTATCATAGCATTCTTTGAGGGATGGCTTCTAACTGTGGTCATGCTATCTTCTATTCCTCCTATTGTCTTTTCTGGTGCCATGATGAGCATTGTTCTTGCCAAAGCGACATCCCGTGGACAAAAAGCCTATTCTACTGCTGCAACTATAGTAGACCAGACAATTGGTTCTATCCGAACAGTTGCATCATTCACAGGGGAGAAGCAAGCTATAGCCAAATATGATCAGTCCTTGATTAAAGCGTACAAGACTAGTGTCCAAGAGGGACTGGCTTCTGGTTTGGGTTTTGGTTCAACCTTTCTTCTTTTTTTCTTCACTTATGGTTTGGCTGTATGGTATGGTGGCAAAATGGTACTGGAGAAAGGATACACAGGAGGGAAGATTATCACTGTAATTTTTGCGGTATTGACAGGCTCCTTGTCTCTAGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTCCAAGATGTTTGAAACAATAAAAAGGAAGCCTGACATCGATGCTTATGACACTGCTGGCAAGAAGCTAGATGACATACATGGGGATATAGAACTGAGGGAAGTTTGCTTTAGTTATCCTGCAAGACCAGATGAACCCATATTCAATGGATTTTCTCTCTCAATACTAAGTGGCACTTCAACGGCCTTGGTAGGACAAAGTGGCAGTGGAAAATCAACAATTATAAGTCTGATAGAAAGGTTTTATGATCCACAAGCTGGTGAAGTTCTCATTGATGGTATCAATATCAAAGAGTTGCAGCTAAAATGGATCAGACAGAAAATAGGTCTTGTCAGCCAGGAACCGGTTTTGTTTACTTGTAGCATTAAAGAGAACATTGCCTATGGCAAGGATGATGCAACAGATGAAGAAATCAGAGCAGCAGCAGAGCTTGCATATGCTGCTAAATTCATAGATAAACTTCCTCAGGGGTTAGACACAATGGTTGGTGAACATGGAACCCAGCTGTCTGGGGGTCAAAAGCAGAGGGTAGCCATAGCAAGAGCAATATTGAAAGACCCAAGAATTCTTCTTCTCGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATTGTACAGGAGGCACTGGACAGAATAATGATAAACAGAACCACTGTTATTGTAGCACATCGCTTGAGTACTGTAAGGAATGCTGATATTATTGCCGTTATTCATCAAGGAAAAATAGTAGAGAAAGGTTCACATGATGAGCTCGCTAAGGACCCTGATGGAACATATAGCCAACTCATTAGATTGCAGGAAACAAAGGAGTCAGAGACCATTAGTGCAAAAGACAGGGATAAGCCAGAAAGCATAATGAATTCTGAAAGGCAATCAAGTCAAAGACTTTCTTCCTTTAAATCTATAAGTCCAGAGTCATCCGGACTTGGAAGAAGCAGTCGTCGTTCATCCTCAGTGCCATATGGTGTGCCTCCAACAAATGGACGCTTTGAAACTGCAGGTGCAGAACCTGGAGCTTCTGGTTCAACAGATCTACCAACACCTCCAGAAGTGCCACTTTACCGCCTGGCTCATCTAAACAAGCCTGAGATCCCAGTTTTACTAATAGGGACTCTAGTTGCCGTGGCAAATGCAGCAATATTCCCAGCTTTCGGGTTACTGCTCTCCAAAATGATAAACACTTTCTATGAACCTTCAGATAAACTCAGCAAAGATTCAAAGTTTTGGGCATTGATATTTGTTGCTCTTGGGGTGGCATCCTTCTTAGTGATTCCAGCAAAGTTCTACTTTTTTGCTGTGGCTGGTGGTAAGTTGATAAGAAGGATCCGGTTAATGTGTTTCGAGAAGATAATTCACATGGAAGTAAGTTGGTTTGACGAAGCTGAGCATTCAAGTGGAGCCCTTGGTGCCAGGCTATCTACTGATGCAGCTTCTGTTCGAGCTCTGGTAGGAGATGCACTTGTTTTGCTGGTTCAAAATAGTGCTACTGCAATTATTGGATTGGTGATTGCTTTGGAGGCGTGCTGGCAGCTTGCTCTTATAATTCTTGTTATGCTACCCCTATTAGTACTCAATGGATACGCACAGTTCAAGTTCATAGAAGGATTCAGCGCAGATGCTAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAGTGATGCAGTAGGGAGCATTAGAACTATTGCTTCTTTCTGTGCTGAGGAGAAGGTGATGGAGTTATACCATAGAAGCTGTGAAGGGCCAATTAAAACAGGAATAAGGAGAGGGATAATAAGTGGAACTGGGTTTGGTTTATCATTCTTCTTGCTGTTTTCTGTCTATGCGTGCAGTTTTTATGCTGGAGCTCGGCTTGTAGAAGATGGCAAATCATCATTCTCTGATGTTTTTCGTGTCTTCTTTGCTCTCACTGTATCAGCACTAGGAATCTCCCAATTTAGCTCCTTGGCTCCTGATTCTAGTAAAGCGAAAAGTTCTGTTGGTTCTATATTTGCTATTCTTGATGGGAAATCAAAAATAGACCCCAGTGATGACTCTGGAATGACATTGGAACACTTAAAGGGAGAAATTGAATTTCGCCATGTCAGTTTCAAGTATCCATCCAGACCTGATGTTCAAGTATTCAGAGATCTTTCCTTCAGCATTCGTTCAGGAAAGACAGTTGCTCTAGTTGGAGAAAGTGGAAGTGGGAAATCAACTGTAATCTCGTTGCTGCAGAGATTTTATGACCCTGATTCAGGTCACATAACATTGGATGGAATAGAAATCCCAAAGCTACAAGTTAAATGGTTAAGACAACAAATGGGTTTGGTAAGCCAAGAGCCTATGTTATTTAATGACACAATCAGAGCCAATATTGCATATGGAAAGGAAAGGGATGCAACAGAGGCAGAAATTATTGCTGCAGCAGAACTTGCAAATGCTCACAAGTTTATTAGTAGTTTGCAGCAGGGGTATGATACAATAGTGGGAGAGCGAGGAGCTCAGTTATCTGGGGGACAAAAGCAGCGGGTGGCTATTGCACGAGCCATAGTAAAGAATCCGAAGATATTACTTCTAGATGAAGCTACCAGTGCCCTGGATGCTGAATCTGAGAAAGTGGTTCAGGATGCATTGGATCAAATCATGGTGGAAAGAACCACAGTAATAGTGGCTCACAGGTTATCTACAGTTAAGAGTGCAGATTTGATTGCAGTAATTAAAAATGGGATCATAGAAGAGAAGGGAAAGCATGAAACTTTGCTCAACAAAGGTGATGCCTATGCTTCTTTAGCAGCATTGCGCACGAGTTCCTCCTTAAAAGAACTCAATTGA 3912 0.4218 MTRETSLGGDIITTSETRSSTSNPIGGSPEKVQGESDKHQGSKEIKEKDETTNTVPFYKLFSFADSLDYLSMLVGTVGAVANGIAMPLMTIFMGNVIDAYGRSADTKQVVHEVSKVSLKFVYLAVGSFLVSFLQVTCWMVTGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQCVATFFGGFIIAFFEGWLLTVVMLSSIPPIVFSGAMMSIVLAKATSRGQKAYSTAATIVDQTIGSIRTVASFTGEKQAIAKYDQSLIKAYKTSVQEGLASGLGFGSTFLLFFFTYGLAVWYGGKMVLEKGYTGGKIITVIFAVLTGSLSLGQASPSLSAFAAGQAAASKMFETIKRKPDIDAYDTAGKKLDDIHGDIELREVCFSYPARPDEPIFNGFSLSILSGTSTALVGQSGSGKSTIISLIERFYDPQAGEVLIDGINIKELQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDDATDEEIRAAAELAYAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTVRNADIIAVIHQGKIVEKGSHDELAKDPDGTYSQLIRLQETKESETISAKDRDKPESIMNSERQSSQRLSSFKSISPESSGLGRSSRRSSSVPYGVPPTNGRFETAGAEPGASGSTDLPTPPEVPLYRLAHLNKPEIPVLLIGTLVAVANAAIFPAFGLLLSKMINTFYEPSDKLSKDSKFWALIFVALGVASFLVIPAKFYFFAVAGGKLIRRIRLMCFEKIIHMEVSWFDEAEHSSGALGARLSTDAASVRALVGDALVLLVQNSATAIIGLVIALEACWQLALIILVMLPLLVLNGYAQFKFIEGFSADAKKLYEEASQVASDAVGSIRTIASFCAEEKVMELYHRSCEGPIKTGIRRGIISGTGFGLSFFLLFSVYACSFYAGARLVEDGKSSFSDVFRVFFALTVSALGISQFSSLAPDSSKAKSSVGSIFAILDGKSKIDPSDDSGMTLEHLKGEIEFRHVSFKYPSRPDVQVFRDLSFSIRSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGIEIPKLQVKWLRQQMGLVSQEPMLFNDTIRANIAYGKERDATEAEIIAAAELANAHKFISSLQQGYDTIVGERGAQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDQIMVERTTVIVAHRLSTVKSADLIAVIKNGIIEEKGKHETLLNKGDAYASLAALRTSSSLKELN 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0914 1303 Gene3D - 393 646 IPR027417 -
Prci4g0914 1303 Pfam ABC transporter 1075 1224 IPR003439 GO:0005524
Prci4g0914 1303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1045 1292 IPR027417 -
Prci4g0914 1303 Pfam ABC transporter 414 562 IPR003439 GO:0005524
Prci4g0914 1303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 633 IPR027417 -
Prci4g0914 1303 Gene3D ABC transporter type 1, transmembrane domain 118 1030 IPR036640 GO:0005524|GO:0016020
Prci4g0914 1303 MobiDBLite consensus disorder prediction 1 29 - -
Prci4g0914 1303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 395 631 IPR003439 GO:0005524
Prci4g0914 1303 ProSitePatterns ABC transporters family signature. 534 548 IPR017871 GO:0005524|GO:0016887
Prci4g0914 1303 Pfam ABC transporter transmembrane region 72 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g0914 1303 Pfam ABC transporter transmembrane region 734 1006 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g0914 1303 MobiDBLite consensus disorder prediction 1 48 - -
Prci4g0914 1303 FunFam ABC transporter B family member 1 714 1022 - -
Prci4g0914 1303 MobiDBLite consensus disorder prediction 637 653 - -
Prci4g0914 1303 FunFam ABC transporter B family member 1 385 634 - -
Prci4g0914 1303 Gene3D - 1046 1300 IPR027417 -
Prci4g0914 1303 CDD ABC_6TM_Pgp_ABCB1_D1_like 72 356 - -
Prci4g0914 1303 SMART AAA_5 422 594 IPR003593 GO:0016887
Prci4g0914 1303 SMART AAA_5 1083 1277 IPR003593 GO:0016887
Prci4g0914 1303 SUPERFAMILY ABC transporter transmembrane region 722 1036 IPR036640 GO:0005524|GO:0016020
Prci4g0914 1303 CDD ABC_MTABC3_MDL1_MDL2 1056 1291 - -
Prci4g0914 1303 MobiDBLite consensus disorder prediction 631 713 - -
Prci4g0914 1303 FunFam ABC transporter B family member 9 59 391 - -
Prci4g0914 1303 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 735 1021 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g0914 1303 PANTHER ABC TRANSPORTER B FAMILY 32 636 IPR039421 -
Prci4g0914 1303 SUPERFAMILY ABC transporter transmembrane region 59 377 IPR036640 GO:0005524|GO:0016020
Prci4g0914 1303 CDD ABC_6TM_Pgp_ABCB1_D2_like 726 1039 - -
Prci4g0914 1303 FunFam ABC transporter B family member 1 1046 1295 - -
Prci4g0914 1303 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1056 1293 IPR003439 GO:0005524
Prci4g0914 1303 MobiDBLite consensus disorder prediction 654 690 - -
Prci4g0914 1303 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 73 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci4g0914 1303 CDD ABC_MTABC3_MDL1_MDL2 395 633 - -
Prci4g0914 1303 MobiDBLite consensus disorder prediction 32 48 - -
Prci4g0914 1303 ProSitePatterns ABC transporters family signature. 1196 1210 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0914 Prci-Chr4 6695857 6702792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0914 1 641 Calmodulin-binding Proteins AT2G36910 35.248 1.82e-113 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0914 K05658 - gmx:100800293 1832.38