Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0897 ATGAGAACAGGAGAACAAGTCGATGGCCAGCAAACCCAGTCATCATCGTCATCTTCTTCTTCAATTGATAGCAGTAATTACCCTTGTGGGACTGCGAAACCTGCAGCTTCTTCTTCTCACTCTTCCTCTTCGTGTCTCTCAAGTGTTTGTGGAAATACCAGTAGTTCCAGAACTGATTTGATCACTGACCTGAGACTTGGTCTTACCATTTCTCCTTCTCAACCTGGCTTTTCCAATTCAAATCCCAGGTCACGGAATCATACTTCAGATTGGCCTCCAATCAAGTCCATACTGAGAAGCACTCTTGTGGAGAAACAAAACCAGTGGAGCGAAGGGCCTTCCTTATTTGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAATTGAACCTTCTGGCACACCATAGTTATGATGGGCTTGTCAGAGCTCTAGGTCACATGTTCAGGACCACCATTCTCTGCCCCAATTCCCAAGCACTTCATTCTGGAAATTTTCATGTGTTAACTTACGAGGATCAAGAAGGAGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTCTTGACTAGTGTGAAAAGGCTGAAGATCACCAGAGCAGACAGATGCTAG 615 0.4504 MRTGEQVDGQQTQSSSSSSSSIDSSNYPCGTAKPAASSSHSSSSCLSSVCGNTSSSRTDLITDLRLGLTISPSQPGFSNSNPRSRNHTSDWPPIKSILRSTLVEKQNQWSEGPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRALGHMFRTTILCPNSQALHSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0897 204 Gene3D - 109 204 - -
Prci4g0897 204 SUPERFAMILY CAD & PB1 domains 106 198 - -
Prci4g0897 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 61 202 IPR003311 GO:0005634|GO:0006355
Prci4g0897 204 MobiDBLite consensus disorder prediction 1 44 - -
Prci4g0897 204 MobiDBLite consensus disorder prediction 72 92 - -
Prci4g0897 204 Pfam AUX/IAA family 75 200 IPR033389 -
Prci4g0897 204 ProSiteProfiles PB1 domain profile. 114 203 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0897 Prci-Chr4 6604983 6607757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0897 117 204 B3 DNA Binding Superfamily AT2G46530 34.091 1.16e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci4g0897 AUX_IAA 3.1e-34 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0897 K14484 - gmx:100527448 268.47