Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0885 ATGGCTCTCTCATGTTCAACCAAAATGGAGTCTGGAACACCCACCTCCTTCTCATTCATTATCTCGGTGATTCTGATTCTGGGTGTATTAACTCCTACTAGTGATGCTCGTGGAAGTGATCTCAAGGGGTTAGAGTGCTTGAAGGTTTCCTCTTCGGATTTCAGAGACTCTGTGCAAGGAGTCATTCAGGTTTTACAGCGTGTTACCTCCATCTTGTCTAGGTTTCCCAATGGGAGAGATTTTCGCCTCTCCAATGCCATTTTTGACTGCCTTGACTTGCTTGATTTGTCTTTTGATGACCTCCAGTTGTCTTCCTCTGCTACTCAGATTCCCACAGGCCAGCAAAACGGCACAGGAAACCTGAGCTCCGATCTAAGAACATGGCTGAGTGCTGCACTTGCAAATCCACAGACATGCATGGAAGGGTTCGAAGGCATCAATAGCATTATAGATAACCTGTTATCATCTCTTCTAAGCCAAATGATCTCATCGATCCAGCATCTCTTAACACAGGTTCACCATGTTCCTGACGACTTCCATGCAAGCGAAATACAGTTTCCTCCATGGATCAAACCAAGGGACCAGAAGGTCCTACAATCAGATGAGATTAATGTGGATGTTGTAGTAGCAGCAGATGGAACTGGAACTTTCACCAGTGTGGCAGATGCAGTGCAAGCAGCTCCTGATTATAGCATGAAACGTTTTGTGATATACGTTAAGAGGGGCCTGTACAAAGAGAATGTGGAGATCAAGAAGAAGAAATGGAACATCATGATGATTGGTGAAGGCATGGATGCCACTGTTATCTCCGGTGATCGGAATTTCTACGATGGGTGGACCACATACCGCTCGGCTACTTTCGCTGTTAGCGGGAGAGGATTCATAGCTCGAGACATTACTTTCCAGAACACGGCAGGTCCAGAGAAGCACCAAGCAGTGGCACTGAGATCAAACTCTGACCTATCTGTCTTCTACCGCTGCGGCATCTATGGCTACCAAGACAGCCTCTACACACACACAATGCGTCAATTCTACAGAGAATGTCGAATAAAAGGTTCTGTGGATTTCATCTTCGGAGATGCCGCAGCAGTGTTCCAAAAGTGCCAGATTCAGGCCAAAAGAGGGCTTCCAGGTCAGAAAAACGCCATCACAGCCCAAGGAAGAAAAGATCCACACGAACCAACAGGGTTCTCCTTCCAATTCTGCAACATTTCTGCAGATTCCGACCTTCTTCCTTTCGTCGGATCCATCGAAACATACCTTGGGAGGCCCTGGAGGGCATACTCTCGAACAGTTTACATGCAAACCTACATGAGCAACGCGGTGGCGCCACGAGGCTGGCTCGAGTGGAACGGCGATGAATCTTCGTTGTACTACGCAGAGTACATGAACGGTGGTCCAGGAGCTGCCCTGGAGAACCGAGTCAAATGGGCAGGGTTCCATGTGTTGAAGGACGCGAGGGAGGCTTATCACTTCACAGTGGCTGATTTTATTCAAGGTAATCTATGGCTGCCTCACACAGGTGTGATGTACACAGCTGGTTTAAGTGCTTAA 1554 0.4768 MALSCSTKMESGTPTSFSFIISVILILGVLTPTSDARGSDLKGLECLKVSSSDFRDSVQGVIQVLQRVTSILSRFPNGRDFRLSNAIFDCLDLLDLSFDDLQLSSSATQIPTGQQNGTGNLSSDLRTWLSAALANPQTCMEGFEGINSIIDNLLSSLLSQMISSIQHLLTQVHHVPDDFHASEIQFPPWIKPRDQKVLQSDEINVDVVVAADGTGTFTSVADAVQAAPDYSMKRFVIYVKRGLYKENVEIKKKKWNIMMIGEGMDATVISGDRNFYDGWTTYRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSNSDLSVFYRCGIYGYQDSLYTHTMRQFYRECRIKGSVDFIFGDAAAVFQKCQIQAKRGLPGQKNAITAQGRKDPHEPTGFSFQFCNISADSDLLPFVGSIETYLGRPWRAYSRTVYMQTYMSNAVAPRGWLEWNGDESSLYYAEYMNGGPGAALENRVKWAGFHVLKDAREAYHFTVADFIQGNLWLPHTGVMYTAGLSA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0885 517 PANTHER PECTINESTERASE 55 505 - -
Prci4g0885 517 SUPERFAMILY Pectin lyase-like 205 514 IPR011050 -
Prci4g0885 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 173 IPR035513 -
Prci4g0885 517 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Prci4g0885 517 CDD PMEI-like_4 16 173 - -
Prci4g0885 517 Pfam Pectinesterase 206 501 IPR000070 GO:0030599|GO:0042545
Prci4g0885 517 SMART PMEI_2 31 168 IPR006501 GO:0004857
Prci4g0885 517 Pfam Plant invertase/pectin methylesterase inhibitor 66 149 IPR006501 GO:0004857
Prci4g0885 517 FunFam Pectinesterase 200 515 - -
Prci4g0885 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 158 IPR035513 -
Prci4g0885 517 Gene3D - 200 515 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0885 Prci-Chr4 6482893 6485525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0885 24 515 Carbohydrate Esterase AT3G43270 58.627 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0885 K01051 - qsa:O6P43_021969 655.595