Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0884 ATGGCTCTCTCATGTTCAACCAAAATGGAGTCTGGAACACCCACCTCCTTCTCATTCATTATCTCGGTGATTCTGATTCTGGGTGTATTAACTCCTACTAGTGATGCTCGTGGAAGTGATCTCAAGGGGTTAGAGTGCTTGAAGGTTTCCTCTTCGGATTTCAGAGACTCTGTGCAAGGAGTCATTCAGTTGTCTTCCTCTGCTACTCAGATTCCCACAGGCCAGCAAAACGGCACAGGAAACCTGAGCTCCGATCTAAGAACATGGCTGAGTGCTGCACTTGCAAATCCACAGACATGCATGGAAGGGTTCGAAGGCATCAATAGCATTATAGATAACCTGTTATCATCTCTTCTAAGCCAAATGATCTCATCGATCCAGCATCTCTTAACACAGGTTCACCATGTTCCTGACGACTTCCATGCAAGCGAAATACAGTTTCCTCCATGGATCAAACCAAGGGACCAGAAGGTCCTACAATCAGATGAGATTAATGTGGATGTTGTAGTAGCAGCAGATGGAACTGGAACTTTCACCAGTGTGGCAGATGCAGTGCAAGCAGCTCCTGATTATAGCATGAAACGTTTTGTGATATACGTTAAGAGGGGCCTGTACAAAGAGAATGTGGAGATCAAGAAGAAGAAATGGAACATCATGATGATTGGTGAAGGCATGGATGCCACTGTTATCTCCGGTGATCGGAATTTCTACGATGGGTGGACCACATACCGCTCGGCTACTTTCGCTGTTAGCGGGAGAGGATTCATAGCTCGAGACATTACTTTCCAGAACACGGCAGGTCCAGAGAAGCACCAAGCAGTGGCACTGAGATCAAACTCTGACCTATCTGTCTTCTACCGCTGCGGCATCTATGGCTACCAAGACAGCCTCTACACACACACAATGCGTCAATTCTACAGAGAATGTCGAATAAAAGGTTCTGTGGATTTCATCTTCGGAGATGCCGCAGCAGTGTTCCAAAAGTGCCAGATTCAGGCCAAAAGAGGGCTTCCAGGTCAGAAAAACGCCATCACAGCCCAAGGAAGAAAAGATCCACACGAACCAACAGGGTTCTCCTTCCAATTCTGCAACATTTCTGCAGATTCCGACCTTCTTCCTTTCGTCGGATCCATCGAAACATACCTTGGGAGGCCCTGGAGGGCATACTCTCGAACAGTTTACATGCAAACCTACATGAGCAACGCGGTGGCGCCACGAGGCTGGCTCGAGTGGAACGGCGATGAATCTTCGTTGTACTACGCAGAGTACATGAACGGTGGTCCAGGAGCTGCCCTGGAGAACCGAGTCAAATGGGCAGGGTTCCATGTGTTGAAGGACGCGAGGGAGGCTTATCACTTCACAGTGGCTGATTTTATTCAAGGTAATCTATGGCTGCCTCACACAGGTGTGATGTACACAGCTGGTTTAAGTGCTTAA 1437 0.4795 MALSCSTKMESGTPTSFSFIISVILILGVLTPTSDARGSDLKGLECLKVSSSDFRDSVQGVIQLSSSATQIPTGQQNGTGNLSSDLRTWLSAALANPQTCMEGFEGINSIIDNLLSSLLSQMISSIQHLLTQVHHVPDDFHASEIQFPPWIKPRDQKVLQSDEINVDVVVAADGTGTFTSVADAVQAAPDYSMKRFVIYVKRGLYKENVEIKKKKWNIMMIGEGMDATVISGDRNFYDGWTTYRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSNSDLSVFYRCGIYGYQDSLYTHTMRQFYRECRIKGSVDFIFGDAAAVFQKCQIQAKRGLPGQKNAITAQGRKDPHEPTGFSFQFCNISADSDLLPFVGSIETYLGRPWRAYSRTVYMQTYMSNAVAPRGWLEWNGDESSLYYAEYMNGGPGAALENRVKWAGFHVLKDAREAYHFTVADFIQGNLWLPHTGVMYTAGLSA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0884 478 Pfam Pectinesterase 167 462 IPR000070 GO:0030599|GO:0042545
Prci4g0884 478 ProSitePatterns Pectinesterase signature 2. 311 320 IPR033131 -
Prci4g0884 478 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 134 IPR035513 -
Prci4g0884 478 PANTHER PECTINESTERASE 63 466 - -
Prci4g0884 478 FunFam Pectinesterase 161 476 - -
Prci4g0884 478 SUPERFAMILY Pectin lyase-like 166 475 IPR011050 -
Prci4g0884 478 Pfam Plant invertase/pectin methylesterase inhibitor 40 110 IPR006501 GO:0004857
Prci4g0884 478 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 119 IPR035513 -
Prci4g0884 478 Gene3D - 161 476 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0884 Prci-Chr4 6482893 6485525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0884 49 476 Carbohydrate Esterase AT3G43270 62.387 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0884 K01051 - qsa:O6P43_021969 612.838