Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0882 ATGGCATTTCAAGACTTCGATCTCATCACCGAGAAAAGAAAAAATGATAGGAAACAAAAGCTCAAGCGCAGAATCGCCATTGGCGCAGTTTGCACCATCGTCATCATTGGTCTAATAGGAGCAGCCGCTTTCGTAATCGTGAGCAATAATAATGAAGAAGAAAGCGAACTCAATGACCATAACAAGAAATCCCCACCATCTTCCTCCAAGGGTAGCCCCAACAGCAACTCCAACCAGATTTCTGTAGCAGAGAAACTCGTGAAGACCATTTGCGATATCACCGACTACAAGGACAAATGCGAGACAAGTCTTGACAAGGAAGTGAAAAAGGATCCTAAAATCGCACAACCCAGAGATGTCCTCAAGCTTGCCATCGGCGTTGCTGCGGACGAGCTCAATAAGGCCCTAAATAAAACCAAGGACCTCAACTTTCTAACCGATAAAGAGAAAGGGGCTTACGAAGATTGCAAGAAGCTTTTGGATCGCGCAAAAGACGATCTCGGGAATTCATCCTCACATGTTGGATCCATTGACATGAACAAGCTCGCGTTATCCTCTTCGGATTTGAATAGTTGGCTAAGTGCAGTTATCTCGTTCCAGGGAGCTTGCCTCGATGGGTTTTCTGAAGGGAAACTGAAGACAGAAATGCAGAGTGCTTTTCAGGATTCAATGGAGTATGTTAGCAATTCTCTTGCCATTCTATCGCAGTTAGGCTCCGTGGTTTCTTCAGCGCTAAAGGAAGGTGCTAACCGTCACTTGCTGTCGACCGATGATAAAGGTCTTCCGGAGTGGATGAACGATGAGGATCGAAGGATGTTGAAGGCCGCAGATGATAAGCCTACCCCTAACGTCACGGTGGCTGGCGATGGCAGTGGAGACTTCAAAACCATCTCCGAAGCCTTGAAAGCCATACCACAAAAATACGATGGGCGGTATGTGGTTTATGTTAAAGCAGGAACATATGACGAGACAGTGTTAATAGAAGAGCGAATGGTAAACCTAACCCTTTACGGTGACGGATCACAAAAAAGCATAATCACCGGCAACAAGAACTTCGTAGATGGAGTAAGGACTTTCCAAACCGCATCATTTGCCGTAGAAGCAGATGGATTTCTAGGAAAAGCAATGGGGTTCAGAAACACAGCAGGTCCAGAGAAGCACCAAGCGGTTGCAGCAAGAGTGCAAGGAGATCGTGCGGTGTTTGTCAATTGTCGTTTCGAAGCGTTCCAAGACACTCTCTATGCCCTAGCCCACAGGCAGTTCTACCGGAGCTGTGTGATCTCAGGCACGGTCGACTTCATCTTCGGCGACGCAGCCGCCATCTTCCAGAACTGCATAATGAACATAAGAAAACCCTTAGACAACCAGCAGAACATAGTGACAGCACAAGGCAGAATGGACCCACGAGAAACCACGGCCATCGTTCTGCAAGGCTGCCAGATCAAGGCCGACGACTCACTCGCCCCCATGAAAGACAATTTCAAGAGCTACCTCGGCAGGCCGTGGAAGGAATACTCCAGAACCGTTGTCATGGAATCCGAGATCGATGATATCATAGACCCTGAAGGGTGGATGGAATGGGAAGGTGACTTCGCACTCAGCACTTTGTTCTACGCTGAGTTCAACAATACCGGAGCCGGCGCGAATACTGATAATAGAGTGAAGTGGCCTGGCTACAAAAAAATCAGTAGGGACGAGGCTAGCAACTTCACCGTCGACTCTTTCTTGGCCGGTAATTGGATCTCCGGGATCAACGTACCGGTTCAGCGAGGCTTGTACAACTAA 1785 0.4796 MAFQDFDLITEKRKNDRKQKLKRRIAIGAVCTIVIIGLIGAAAFVIVSNNNEEESELNDHNKKSPPSSSKGSPNSNSNQISVAEKLVKTICDITDYKDKCETSLDKEVKKDPKIAQPRDVLKLAIGVAADELNKALNKTKDLNFLTDKEKGAYEDCKKLLDRAKDDLGNSSSHVGSIDMNKLALSSSDLNSWLSAVISFQGACLDGFSEGKLKTEMQSAFQDSMEYVSNSLAILSQLGSVVSSALKEGANRHLLSTDDKGLPEWMNDEDRRMLKAADDKPTPNVTVAGDGSGDFKTISEALKAIPQKYDGRYVVYVKAGTYDETVLIEERMVNLTLYGDGSQKSIITGNKNFVDGVRTFQTASFAVEADGFLGKAMGFRNTAGPEKHQAVAARVQGDRAVFVNCRFEAFQDTLYALAHRQFYRSCVISGTVDFIFGDAAAIFQNCIMNIRKPLDNQQNIVTAQGRMDPRETTAIVLQGCQIKADDSLAPMKDNFKSYLGRPWKEYSRTVVMESEIDDIIDPEGWMEWEGDFALSTLFYAEFNNTGAGANTDNRVKWPGYKKISRDEASNFTVDSFLAGNWISGINVPVQRGLYN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0882 594 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 239 IPR035513 -
Prci4g0882 594 Pfam Pectinesterase 283 579 IPR000070 GO:0030599|GO:0042545
Prci4g0882 594 ProSitePatterns Pectinesterase signature 2. 427 436 IPR033131 -
Prci4g0882 594 PANTHER PECTINESTERASE 44 582 - -
Prci4g0882 594 Pfam Plant invertase/pectin methylesterase inhibitor 86 233 IPR006501 GO:0004857
Prci4g0882 594 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 237 IPR035513 -
Prci4g0882 594 CDD PMEI-like_3 89 239 - -
Prci4g0882 594 MobiDBLite consensus disorder prediction 55 78 - -
Prci4g0882 594 NCBIfam pectinesterase inhibitor domain 77 237 IPR006501 GO:0004857
Prci4g0882 594 SMART PMEI_2 82 233 IPR006501 GO:0004857
Prci4g0882 594 MobiDBLite consensus disorder prediction 64 78 - -
Prci4g0882 594 FunFam Pectinesterase 83 238 - -
Prci4g0882 594 SUPERFAMILY Pectin lyase-like 281 583 IPR011050 -
Prci4g0882 594 Gene3D - 281 594 IPR012334 -
Prci4g0882 594 FunFam Pectinesterase 277 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0882 Prci-Chr4 6471912 6474500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0882 1 594 Carbohydrate Esterase AT2G26450 47.896 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0882 - - gmx:100784679 752.666