Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0871 ATGGGAAGAGAAAGGGAGGTGCCGAAGCAGCAACAAGAGGTGGGATACGCGGTGGAGCAGCTTGTCGCTGTTAATCGCTATAATCCTGACATCCTTCCTGATCTCGAAAACTATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCTGAGAGAATGAGTTCCCAGATCGTAGCTCGCATATTGGTTAAGGCCCTCATGGCAATGCCGGCTCCAGACTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATCGTTTTATCGCACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAATCGTGATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTCCTCTCGTTAACTTACCAAAAAGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTAGACAAATTCCTTGAACACCAGGTAGCCAACAGTGGTTGGGTCATTGAGAAAGGCCACGGCAAGGGTCAGCTCATTGTCCTACCAAGAAATGAATTCAATGACCCAGCATCGAAGAAAAACACTGCAGACACAGTGCCATTGGAGCACATTACACGTATTTTCCCTATTCTGGGCTGA 702 0.4615 MGREREVPKQQQEVGYAVEQLVAVNRYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRDIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANSGWVIEKGHGKGQLIVLPRNEFNDPASKKNTADTVPLEHITRIFPILG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0871 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Prci4g0871 233 Pfam CSN8/PSMD8/EIF3K family 68 192 IPR033464 -
Prci4g0871 233 SUPERFAMILY ARM repeat 12 136 IPR016024 -
Prci4g0871 233 Gene3D - 129 231 IPR036388 -
Prci4g0871 233 FunFam Eukaryotic translation initiation factor 3 subunit K 129 232 - -
Prci4g0871 233 Gene3D ARM repeat; domain 1 9 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Prci4g0871 233 FunFam Eukaryotic translation initiation factor 3 subunit K 10 126 - -
Prci4g0871 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Prci4g0871 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
Prci4g0871 233 ProSiteProfiles PCI domain profile. 48 207 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0871 Prci-Chr4 6373287 6377415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0871 1 233 Eukaryotic Initiation Factors Gene Family AT4G33250 75.966 1.46e-129 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0871 K15028 - qsa:O6P43_002615 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0871 4 6373287 6377415 Prci4g0871 4 6373287 6377415 ECH