Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0870 ATGGGAAGAGAAAGGGAGGTGCCGAAGCAGCAACAAGAGGTGGGATACGCGGTGGAGCAGCTTGTCGCTGTTAATCGCTATAATCCTGACATCCTTCCTGATCTCGAAAACTATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGGCCCTCATGGCAATGCCGGCTCCAGACTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATCGTTTTATCGCACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAATCGTGATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTCCTCTCGTTAACTTACCAAAAAGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTAGACAAATTCCTTGAACACCAGGTAGCCAACAGTGGTTGGGTCATTGAGAAAGGCCACGGCAAGGGTCAGCTCATTGTCCTACCAAGAAATGAATTCAATGACCCAGCATCGAAGAAAAACACTGCAGACACAGTGCCATTGGAGCACATTACACGTATTTTCCCTATTCTGGGCTGA 651 0.4639 MGREREVPKQQQEVGYAVEQLVAVNRYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRDIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLALDKFLEHQVANSGWVIEKGHGKGQLIVLPRNEFNDPASKKNTADTVPLEHITRIFPILG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0870 216 SUPERFAMILY "Winged helix" DNA-binding domain 121 213 IPR036390 -
Prci4g0870 216 Gene3D ARM repeat; domain 1 9 61 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Prci4g0870 216 Gene3D ARM repeat; domain 1 62 109 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Prci4g0870 216 Gene3D - 112 214 IPR036388 -
Prci4g0870 216 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 216 IPR009374 GO:0003743|GO:0005737|GO:0005852
Prci4g0870 216 Pfam CSN8/PSMD8/EIF3K family 58 175 IPR033464 -
Prci4g0870 216 ProSiteProfiles PCI domain profile. 27 190 IPR000717 -
Prci4g0870 216 SUPERFAMILY ARM repeat 12 119 IPR016024 -
Prci4g0870 216 FunFam Eukaryotic translation initiation factor 3 subunit K 112 215 - -
Prci4g0870 216 FunFam Eukaryotic translation initiation factor 3 subunit K 10 109 - -
Prci4g0870 216 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 213 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0870 Prci-Chr4 6373284 6377415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0870 1 216 Eukaryotic Initiation Factors Gene Family AT4G33250 69.957 2.81e-114 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0870 K15028 - qsa:O6P43_002615 385.185