Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0846 ATGTCGAGCTCCTCGGCTTTTTCCGGCCAGAAGCCGACCAAGTTGCCGGAGAAGCCTTCTTTCTCCCAGACCTGTAGTCTGCTGAGTCACTACCTGAAGGAGAAAGGCAGCTTTGGAGATCTTACCCTCGGGATGACGCGCAGCACCGAAGCAATTGGTGGGTCAACTGAAGCATCTTGTCAGACTGCGACGACCATGGACTTATTTCCAGCCAAGGAAAGCTCTGTAACAACACAGGATTTACTCTCAAATTCCAGTGTGCCTAAGCTTCTGACTAAGGAGCCCAAAGCTGCACAGTTGACAATCTTCTACGCCGGACAAGTCATTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAAGAGATCATGTCTTTCGCCAGCAAAGGAGAGGCTCAAAGCCAGAACCCCCCTGCTTATACTTTTGCTCGGAGCGCACCTTCTTTCCCTGCTAATTTGGTCAGAGCCTCTGCTGATCCCAGTGCCTCCATTTCTCCTCATCCTCAAGCTCCATCCAGACCTGTCACTTGTGATCTACCTATTATGCGTAACGCATCGCTTCACCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCGTATCAAGCAAGCAACCCCACTGGGGGTCCTAGCAAGCCAGTAGAGTCAATGCCTTGGCTGGGAATAGCTGCTAAATCGGCACAAAACTGA 696 0.5072 MSSSSAFSGQKPTKLPEKPSFSQTCSLLSHYLKEKGSFGDLTLGMTRSTEAIGGSTEASCQTATTMDLFPAKESSVTTQDLLSNSSVPKLLTKEPKAAQLTIFYAGQVIVFDDFPAEKAKEIMSFASKGEAQSQNPPAYTFARSAPSFPANLVRASADPSASISPHPQAPSRPVTCDLPIMRNASLHRFLEKRKDRIAAKAPYQASNPTGGPSKPVESMPWLGIAAKSAQN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0846 231 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 212 IPR040390 -
Prci4g0846 231 MobiDBLite consensus disorder prediction 1 21 - -
Prci4g0846 231 MobiDBLite consensus disorder prediction 156 176 - -
Prci4g0846 231 Pfam tify domain 94 127 IPR010399 -
Prci4g0846 231 Pfam Jas motif 179 204 IPR018467 -
Prci4g0846 231 MobiDBLite consensus disorder prediction 197 231 - -
Prci4g0846 231 ProSiteProfiles Tify domain profile. 93 128 IPR010399 -
Prci4g0846 231 SMART tify_2 93 128 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0846 Prci-Chr4 6074501 6076651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0846 17 227 Tify Gene Family AT1G19180 41.935 1.60e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci4g0846 tify 5.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0846 K13464 - gmx:100801449 283.493