Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0786 ATTCTGAAACAAGTGAGACAGAAAACCACCTGGCTACAGAGCTCAAGCACTAATTTTGCCTTCTTTTATCTCACGAGAGTCATATCTCGTTTTCTGAACTTGGGAGCTTCTAGAGAAGCAAGTCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCGGGAGTAGAACCGGCAACCAACTCGCCCACCCTCAACAAGCGCCACACCGATCTTTCCATTAACGATAGCAGCGGCAGGAGCGGCAACCGAGAAGAAGACGAAGAAAGAGACAACGGAGACGAGCCCAAGGAAGGTGCAGTCGACGTCGGAACCCGCAGGCCCAGGGGCCGACCTCCCGGATCAAAAAACAAACCCAAGCCACCCATCTTCGTCACCCGAGATAGCCCCAACGCCCTAAGAAGCCACGTGATGGAGGTTGCAGGAGGAGCCGACGTGGCGGAGAGTGTGGCCCAATTCGCACGGAGGCGTCAGCGTGGTGTTTGCGTGCTCAGTGGAAGCGGCTCCGTCGCCAACGTCACTCTCCGACAACCCGCTGCCCCTGGAGCTGTTGTGGCCCTCCATGGCAGGTTTGAAATTCTATCCCTAACAGGTGCGTTCTTGCCTGGACCTGCCCCTCCCGGCGCGACGGGGCTCACAGTGTATCTCGCAGGAGGACAAGGACAGGTTGTCGGAGGAAGTGTCGTCGGGTCTCTAGTAGCGGCTGGACCAGTGATGGTCATTGCTGCAACGTTTGCTAATGCCACTTACGAAAGACTACCACTTGATGATGAAGATGAGGGAGCCAGTGCCGCTGCACAAGGAGGAGGAGGAGGAGGATCACCACGGGGAATTGGTAGCAGCGGAGGCCAGTCACTGCCGGCCGGACTCCCGGATCCGTCGTCTCTGCCTCTGTACAATCTGCCGCCGAATCTGATGCCCAACGGCGGAGGACAGGTGGGGCACGAAGCTTTTGCTTGGGCTCACGGAAGGCCACCTTACTGA 984 0.5783 ILKQVRQKTTWLQSSSTNFAFFYLTRVISRFLNLGASREASLANPWWTGQVGLPGVEPATNSPTLNKRHTDLSINDSSGRSGNREEDEERDNGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGASAAAQGGGGGGSPRGIGSSGGQSLPAGLPDPSSLPLYNLPPNLMPNGGGQVGHEAFAWAHGRPPY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0786 327 Gene3D - 133 262 - -
Prci4g0786 327 ProSiteProfiles PPC domain profile profile. 130 268 IPR005175 -
Prci4g0786 327 FunFam AT-hook motif nuclear-localized protein 133 260 - -
Prci4g0786 327 MobiDBLite consensus disorder prediction 57 130 - -
Prci4g0786 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 246 IPR005175 -
Prci4g0786 327 CDD DUF296 134 217 IPR005175 -
Prci4g0786 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 258 - -
Prci4g0786 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 78 323 IPR014476 GO:0003680
Prci4g0786 327 MobiDBLite consensus disorder prediction 57 79 - -
Prci4g0786 327 MobiDBLite consensus disorder prediction 258 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0786 Prci-Chr4 5491924 5493159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0786 42 327 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.448 3.44e-109 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0786 - - pop:7467535 371.703