Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0785 ATGTTAAAAAGGGTAGCATCTGGACTGTTGATTTCCTCGCTCCTTGTATGCGTCTCTGCATCGGATAATGGATTCCCCAGATGTAACTGTGATGATGAGACCGGCCTGTGGACTATAGAGAGCATCCTGGAATGCCAGAGAGTCAGTGATTTCCTTATTGCTGTGGCCTATTTTTCCATCCCGATAGAACTTCTTTACTTCATCAGTTGCTCCAACGTCCCATTCAAATGGGTTCTTTTTCAATTCATTGCCTTCATTGTGCTGTGTGGATTGACACATATGCTGAATGGCTGGACTTATGGTCCTCACTCATTCCAACTCATGGTGGCACTTACTGTCTTCAAAATTCTCACTGCCTTGGTATCATGTGCCACTGCTATCACCCTCATCACTCTGATTCCCTTGCTTCTGAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGACTTGGGATCTTGGGCGAGAGGTTGGTCTTATAATGAAACAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGTAAGACGCTTGATAGGCATACAATCCTGTACACCACCCTGGTTGAGCTGTCTGAAACGCTGGGTTTGCAGAATTGTGCAGTTTGGATGCCCAATGTTGATAAAACAGAGATGAACCTGACTCATGAATTAAATGGGAGGAATTTAAATTTCTCTGTACATATTACTGATCCAGATGTTGTAAAAATCAAAGGAAGTGATGGCGTAAATATTCTTAGCCCTGACTCAGCACTTGCTGCTGCCAGCAGTGGGGTTTCAGATGAGGTAGGACCCATAGCTGCCATTCGAATGCCAATGCTTCGGGTTTGCAATTTTAAAGGGGGGACGCCTGAGCTAACTGACTATGCTATTCTGGTTTTAATTCTTCCTGGTGGAGAACCTAGATATTGGAGTGATTATGAGCTAGAGATTATTAAGGTGGTAGCTGATCAGGTTGCTGTGGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTGGAGGAGCAAAATCGAGCTTTGCAACAAGCAAAAAGGAATGCAATGATGGCAAGTCAAGCAAGAAACTCATTTCAGAAGGTCATGGGTGACGGAATGAGAAGGCCAATGCACTCAATTTTGGGTTTGCTGTCAATGATAGTAGATGAGAATTTAAAGAGTGAACAAAAACTCATCGTGGATGCAATGCTTAGGACTAGTAATGTTCTTTCAAACCTGATAAATGATGCCATGGATATTTCAGTAAAGGATGATGGAAGATTTCCGCTGGAGATGAGATCATTTGGGTTACATGCCTTGATAAAAGAGGCAGCTTGCCTTGTCAAGTGCATGTGTGTTTACAAGGGTCTTGGTTTTGCAGTAGAGGTTGATAGATCTTTGCCTGACAATGTCATGGGTGATGAGAGGAGGGTCTTTCAAGTGATTTTGCATATGGTTGGGAACCTGCTGGATGGTAACCACGGCGGAGGCATTCTTGTACTTCGGGTTATTTCAGGAAGTGGGAGTCAGGGAAGGAATGAGCAGGGTTGGACACCCTGGAGACCTAGTTCATCTAGCGGGGATGTATATATTAGATTTGAGATAGGGATAAAAAATAGTAATACTGAATTGGAGAGCTCAGTTTCTGTAGGACAGCTTGGTGGTAGGAAGTATGCCAGTGGCAGTGATAGAGCTGAGGGCAGATTGAGCTTCAGTGTTTGCAAGAGGATAGTTCAGATGATGCAAGGGAACATATGGTTAGTACCGAATACTCAAGGTTTTCCTCAAAGTATGGCCCTTGTTCTTCGGTTTCAATTGCGATCTTCTATAGCTATATCCATCTCAGAACCAGGAGAATCTTCAGAGCGTGCAGATTCTAATTCTTTGTTCCGGGGTATGCATGTCTTGTTGGCCGACAATGATGATGTAAACAGAGCCGTGACCCAAAAATTGCTCCAGAAGCTTGGCTGCATGGTAACTTCTGTTTCTTCAGGCTTTGAATGCCTCACTGTCGTCGGACCAGCTGGGTCTTCTATACAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTCGAAGTTGCCATTAGGATCCGCAAGTATAGAAGCCGAAACTGGCCTGTGATCGTCGCTTTGACTGCGAGTGTAGATGATGACCTGTGGGAAAGATGCGTTCAAACCGGCATCAATGGAGTGATCCGGAAGCCAGTTTTGTTGCAAGGAATTGCCAGCGAACTTAGGAGAATCCTGGGGGAGAGAAGCTAG 2274 0.4428 MLKRVASGLLISSLLVCVSASDNGFPRCNCDDETGLWTIESILECQRVSDFLIAVAYFSIPIELLYFISCSNVPFKWVLFQFIAFIVLCGLTHMLNGWTYGPHSFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKTLDRHTILYTTLVELSETLGLQNCAVWMPNVDKTEMNLTHELNGRNLNFSVHITDPDVVKIKGSDGVNILSPDSALAAASSGVSDEVGPIAAIRMPMLRVCNFKGGTPELTDYAILVLILPGGEPRYWSDYELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKRNAMMASQARNSFQKVMGDGMRRPMHSILGLLSMIVDENLKSEQKLIVDAMLRTSNVLSNLINDAMDISVKDDGRFPLEMRSFGLHALIKEAACLVKCMCVYKGLGFAVEVDRSLPDNVMGDERRVFQVILHMVGNLLDGNHGGGILVLRVISGSGSQGRNEQGWTPWRPSSSSGDVYIRFEIGIKNSNTELESSVSVGQLGGRKYASGSDRAEGRLSFSVCKRIVQMMQGNIWLVPNTQGFPQSMALVLRFQLRSSIAISISEPGESSERADSNSLFRGMHVLLADNDDVNRAVTQKLLQKLGCMVTSVSSGFECLTVVGPAGSSIQVILLDLHMPELDGFEVAIRIRKYRSRNWPVIVALTASVDDDLWERCVQTGINGVIRKPVLLQGIASELRRILGERS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0785 757 Gene3D - 428 606 IPR036890 -
Prci4g0785 757 SMART REC_2 634 753 IPR001789 GO:0000160
Prci4g0785 757 FunFam Ethylene receptor 4 329 423 - -
Prci4g0785 757 Gene3D - 616 752 - -
Prci4g0785 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Prci4g0785 757 Pfam GAF domain 182 326 IPR003018 GO:0005515
Prci4g0785 757 Pfam Response regulator receiver domain 636 743 IPR001789 GO:0000160
Prci4g0785 757 ProSiteProfiles Response regulatory domain profile. 635 753 IPR001789 GO:0000160
Prci4g0785 757 CDD HisKA 360 422 IPR003661 GO:0000155|GO:0007165
Prci4g0785 757 CDD HATPase_ETR2_ERS2-EIN4-like 468 603 - -
Prci4g0785 757 Gene3D - 334 427 - -
Prci4g0785 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 427 590 IPR036890 -
Prci4g0785 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 754 - -
Prci4g0785 757 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 347 427 IPR036097 GO:0000155|GO:0007165
Prci4g0785 757 SUPERFAMILY CheY-like 631 754 IPR011006 -
Prci4g0785 757 FunFam Ethylene receptor 632 756 - -
Prci4g0785 757 Gene3D - 169 333 IPR029016 -
Prci4g0785 757 SUPERFAMILY GAF domain-like 185 329 - -
Prci4g0785 757 CDD REC_ETR-like 636 749 - -
Prci4g0785 757 Coils Coil 332 362 - -
Prci4g0785 757 SMART gaf_1 182 336 IPR003018 GO:0005515
Prci4g0785 757 SMART HisKA_10 362 427 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0785 Prci-Chr4 5460828 5464990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0785 20 753 Miscellaneous Gene Families AT3G04580 58.635 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g0785 GAF 2e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0785 K14509 - gmx:100787425 1228