Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0782 ATGGAGAGGAACAGGTTGAACAGCAGCCTTAAAGATGGCACTTTCACCACCAACAGCAACAAGAACCAAATAATGAAAGGATATTGGGACTGCAAATCTCAGATCAGTTGTGGAGGAGATGATTATATAAATGGATTCTCTTGGCCTCCAAGATCATACACTTGTAGCTTCTGCAACAGGGAATTCAGATCTGCTCAAGCACTTGGCGGCCATATGAATGTGCATAGGAGGGACAGAGCCAGGCTCAGGCAGTCCCCTCCCACTACAACTGATGGTCATTCCCCCATGCTCAACCTAAATCGTAACCCTACCTCTTGTCCTGGCTTTTCAAGCTCAGCAATGTCCTTGTTACCATGTTCATCTTCTTCTACAATGCTCACAAAACCATTCTCTGCCAGCACTTTACCCTCATTGGTTTCTCCTAGACTTTCTTCTTCATCTTCTCCTCCCCCCGCATCTCCTTCTCCTGATCTGAAAAAATGGGTTGTGGACGGTATCTTGTTGAACCCTTCAAGCACCAAGGCCTCAGGATCTACAAAGTTAAAGAATGCAGATTCTTTGTCGGGGTTTGGTGATTATAATGACTCTTTTGCGCAAGATGGTTGCAAAGTGGTAAAGAAGGCTGAGATCATTAGGTTGGACTTGGCCAAGGATGATTTAGATCTGGAGCTTCGATTGGGTACTTACTCTTAG 693 0.4517 MERNRLNSSLKDGTFTTNSNKNQIMKGYWDCKSQISCGGDDYINGFSWPPRSYTCSFCNREFRSAQALGGHMNVHRRDRARLRQSPPTTTDGHSPMLNLNRNPTSCPGFSSSAMSLLPCSSSSTMLTKPFSASTLPSLVSPRLSSSSSPPPASPSPDLKKWVVDGILLNPSSTKASGSTKLKNADSLSGFGDYNDSFAQDGCKVVKKAEIIRLDLAKDDLDLELRLGTYS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0782 230 MobiDBLite consensus disorder prediction 138 157 - -
Prci4g0782 230 SUPERFAMILY beta-beta-alpha zinc fingers 50 79 IPR036236 -
Prci4g0782 230 SMART c2h2final6 53 75 IPR013087 -
Prci4g0782 230 MobiDBLite consensus disorder prediction 70 102 - -
Prci4g0782 230 PANTHER OS07G0101800 PROTEIN 21 228 - -
Prci4g0782 230 Gene3D Classic Zinc Finger 49 95 - -
Prci4g0782 230 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Prci4g0782 230 MobiDBLite consensus disorder prediction 85 102 - -
Prci4g0782 230 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Prci4g0782 230 Pfam C2H2-type zinc finger 53 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0782 Prci-Chr4 5427342 5428557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0782 29 227 C2H2 Transcription Factor Family AT3G23130 39.524 3.56e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci4g0782 zf-C2H2_6 2.6e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0782 - - var:108333719 187.193