Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0778 ATGAAGCATTTTCCTGGGACACCTGGTACTCTCACTGCGCTGGTTCTGAGGTTGTCACAGTGCACTTTCGCTGTTGGATCAATTGCTGCTATGGGTACCACATCCAGTTTCTACGGTATCACGGCTTTTTGTTACTTGATAGCTTCAATGGGTTTGCAAGTCGTTTGGAGTTTTGTGCTTGCCTTGCTGGATGCGTATGCTTTAGTGAGAAAGAAGGTCCTTCACAATTCTCTCTTGGTTAGCCTGTTCGTTGTTGGAGATTGGGTAACAGCAACATTATCTCTAGCAGCAGCTTCTGCCTCAGCCGGCATCGCAGTCCTATACTTCAATGATGCGGGAAGCTGCAAGTTCGGACAAGAATGTCAGAGAATTCGCTCATCTAACAGAAGCCCATCTCGTTGGAATCCTTTCATTTCAAAATGTTAA 426 0.4577 MKHFPGTPGTLTALVLRLSQCTFAVGSIAAMGTTSSFYGITAFCYLIASMGLQVVWSFVLALLDAYALVRKKVLHNSLLVSLFVVGDWVTATLSLAAASASAGIAVLYFNDAGSCKFGQECQRIRSSNRSPSRWNPFISKC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0778 141 PANTHER CASP-LIKE PROTEIN 5B3 1 127 IPR045009 -
Prci4g0778 141 Pfam Casparian strip membrane protein domain 8 124 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0778 Prci-Chr4 5413199 5416578 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci4g0778 DUF588 5.1e-24 CL0396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0778 - - pcin:129308024 228.409