Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0768 ATGGACCGGCACAAGGGGAAGCAGGAGAAGGCAAAGGATGAGACTCGGTACCGGGGCGTCCGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGACCCATCGAAACAAGGGGCGAGGCTGTGGCTGGGGACGTTTGATACGGCGGAAGAAGCAGCCAGAGCCTACGATAGGGCTGCCTTCGACATGAGAGGTCATCTTGCAATCCTTAATTTCCCTAACGAGTATTATTCTCTGCTGAGGCCCCCACCATACTCTCCCTTTATGCCTCCTCCTCTTCCTCCTCCGTCTTCTCACGCTCATGGAAGTGCCAGCTCATCGTCATCTGGTTCCCTGAGGAAACAAGTTTTCGAGTTTGAGTATTTGGATAATCAGGTGCTGGAAGACCTGCTGGAGCCAGAAGAGGAGAAAAAGAAAAGGATGCGAGATTGA 435 0.5448 MDRHKGKQEKAKDETRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFDMRGHLAILNFPNEYYSLLRPPPYSPFMPPPLPPPSSHAHGSASSSSSGSLRKQVFEFEYLDNQVLEDLLEPEEEKKKRMRD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0768 144 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Prci4g0768 144 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Prci4g0768 144 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Prci4g0768 144 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Prci4g0768 144 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Prci4g0768 144 PANTHER DNA-BINDING DOMAIN 8 138 IPR044808 GO:0003700|GO:0009873
Prci4g0768 144 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Prci4g0768 144 MobiDBLite consensus disorder prediction 85 110 - -
Prci4g0768 144 MobiDBLite consensus disorder prediction 85 99 - -
Prci4g0768 144 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Prci4g0768 144 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Prci4g0768 144 Pfam AP2 domain 15 67 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0768 Prci-Chr4 5329709 5330589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0768 14 139 AP2-EREBP Transcription Factor Family AT3G23230 65.873 4.82e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci4g0768 AP2 7e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0768 - - tcc:18603202 142.51