Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0767 ATGGACTCCTCTTTCTCCATCTTCCACTCTCTCGCCTCCGATTTCTCCTCCGATTCCTCCGATTCCTTCTTCTCCTCCAACTTCCACAACTCTTATCTCCCCTTCAACGAGAATGACCCCGACGAGATGCTCCTCTACGGCATGATTTCCGAGGCCAACAACGACTCTTTCCCTTCCGTCAAGGACGAGGAGGTCAGCTCCGAGTCCGACGCCACTGCTTCTGCGGCAGCCGCACCCGCCAAGGATAAGAGCTACAGAGGCGTGCGGCGGCGTCCCTGGGGAAAATTCGCCGCCGAGATAAGGGACTCCACCAGGCACGGCATAAGGGTTTGGCTGGGGACCTTCGATAGTGCGGAGGCGGCGGCTTTAGCTTACGACCAAGCCGCGTTTTCCATGAGAGGATCGGCCGCCATACTGAATTTCCCGGTGGAGAGGGTGAGGGAGTCCCTGAAGGAGATGAACTACGGATCAGAAGACGGTTGCTCGCCGGTGGTGGCTCTGAAGAGAAAGCACTCGTTGAGACGAAAAGTGAATAGCAACAAGAAGAAGAACAAGTCGGACTGCAGAGATGTAAGAATAGACAATGTGGTGGTGCTGGAAGATCTCGGCTCAGATTACTTGGAGCAACTATTGATGTCCTCAGAGAATCCGAGGCCATCAGAACCTCTCTGCCTCAATGTTCATTAA 687 0.5444 MDSSFSIFHSLASDFSSDSSDSFFSSNFHNSYLPFNENDPDEMLLYGMISEANNDSFPSVKDEEVSSESDATASAAAAPAKDKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLKEMNYGSEDGCSPVVALKRKHSLRRKVNSNKKKNKSDCRDVRIDNVVVLEDLGSDYLEQLLMSSENPRPSEPLCLNVH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0767 228 MobiDBLite consensus disorder prediction 57 83 - -
Prci4g0767 228 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Prci4g0767 228 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Prci4g0767 228 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Prci4g0767 228 SUPERFAMILY DNA-binding domain 84 144 IPR016177 GO:0003677
Prci4g0767 228 FunFam Ethylene-responsive transcription factor 2 83 144 - -
Prci4g0767 228 Gene3D AP2/ERF domain 83 144 IPR036955 GO:0003700|GO:0006355
Prci4g0767 228 PANTHER DNA-BINDING DOMAIN 50 213 IPR044808 GO:0003700|GO:0009873
Prci4g0767 228 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Prci4g0767 228 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Prci4g0767 228 CDD AP2 85 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0767 Prci-Chr4 5277682 5278708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0767 33 216 AP2-EREBP Transcription Factor Family AT3G23240 63.784 5.58e-81 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g0767 AP2 8.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0767 K14516 - cave:132179340 248.825