Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0760 ATGGACGGTGGGGTTCTTGATTCTGTGATCAACAGGCTACTTGAAGTCAGAGGGAGACCAGGGAAGCTGGTGAATCTCGCCGAAACAGAAATCAGGCAGCTCTGTTTTGTTTCCAGAGACATCTTCTTGAGGCAGCCTAATCTGTTGGAACTTGAAGCTCCAATTAAGATCTGTGGAGACATTCATGGTCAATATCCTGACCTTCTGAGACTCCTAGAGTACGGTGGATTACCTCCTCGGTCCAATTACTTGTTCTTAGGGGATTACGTGGATCGTGGGAAACAAAGTCTGGAGACAATTTGTCTTCTTCTTGCCTATAAAATAAAGTATCCTGCTAACTTTTTCCTGCTGAGGGGCAATCATGAATGTGCTTCTATCAACAGAATCTATGGATTCTATGATGAATGTAAGTGCAGATACAATGTGAGGCTTTGGAAGATATTCACAGATTGTTTCAACTGCTTGCCGGCGGCAGCTCTTATAGATGACAAAATATTATGCATGCATGGTGGACTCTCCCCTGAGTTGTACAACTTAAAGCAGATCAGGACTCTACCTCGTCCTTGTGAAGTGCCTGAAAGTGGTCTGCTGTGTGATCTCCTTTGGTCTGATCCTTGTAAAGATATTTATGGCTGGGGAGCAAATGACCGCGGTGTTTCGTATACTTTTGGTGCTGATAGGGTCGCAGAATTTCTGAGAAAGAATGATCTGGACTTAATCTGTAGAGCCCACCAGGTCGTGGAAGATGGATATGAATTCTTTGCTAATAGGCAGCTTGTAACTGTGTTCTCAGCACCAAATTACTGTGGAGAGTTTGACAATGCTGGTGCGATGATGACTGTGGATGCGACGCTTAGGTGCTCCTTTCAAATATTAAAGCCTATGGAGAAAAAACCTAAGTTCGGCTTCGGAAGAACAAACGCAGTCAGGCGCCGATCACTCCAACTAACTTGA 954 0.4444 MDGGVLDSVINRLLEVRGRPGKLVNLAETEIRQLCFVSRDIFLRQPNLLELEAPIKICGDIHGQYPDLLRLLEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPANFFLLRGNHECASINRIYGFYDECKCRYNVRLWKIFTDCFNCLPAAALIDDKILCMHGGLSPELYNLKQIRTLPRPCEVPESGLLCDLLWSDPCKDIYGWGANDRGVSYTFGADRVAEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMTVDATLRCSFQILKPMEKKPKFGFGRTNAVRRRSLQLT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0760 317 FunFam Serine/threonine-protein phosphatase 2 302 - -
Prci4g0760 317 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Prci4g0760 317 SMART pp2a_7 26 296 IPR006186 GO:0016787
Prci4g0760 317 SUPERFAMILY Metallo-dependent phosphatases 19 297 IPR029052 -
Prci4g0760 317 Gene3D - 3 305 IPR029052 -
Prci4g0760 317 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
Prci4g0760 317 CDD MPP_PP1_PPKL 5 294 - -
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Prci4g0760 317 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Prci4g0760 317 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Prci4g0760 317 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0760 Prci-Chr4 5153918 5157248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0760 20 242 Calmodulin-binding Proteins AT5G63870 30.566 7.28e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0760 K06269 - gmx:100791655 561.992