Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0751 ATGGTGAGAGCTCCTTGCTGCGAGAAGATGGGACTGAAGAGGGGTCCTTGGACTCCTGAAGAAGACCATCTCTTGGTCTCCTACATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAGGTCTTTTAAGATGTGGGAAGAGTTGCAGATTACGGTGGATCAACTATTTGAGGCCAGATATAAAGAGAGGAAACTTCACGGCTGAAGAAGAAGAAACTATTATTAAGCTGCACGAGATGCTTGGCAACAGGTGGTCAGCCATTGCAGCGAAGCTACCAGGAAGAACAGACAACGAGATAAAAAATGTTTGGCATACCCACTTGAAGAAGAGGCTTCAAAAAACAAAGCAAGCTGATCAGCTCATTAACTCAGAAACCAAAACCAGAGGCTCCAAACCTCATTTAATTAAACGATCTGTTTCCAGTTCCAGCACTGTGACCACTCAATCAGTTTCATCATCGTCTACTTCTTCCAGTGATCTGTTATCCTCAGTATTCACACTAAGAGAAAGCAATGGCATGAATATGTGCATCAAGAGTGAAGACATGGACTCTCTGGAGCCTATATTGCCTCAAATTGAAGAAAGCTTTTGGTCAGAAGCTGCAATGGATGACAATAGCATCGCCATGAACAATGAATTACCAGCTCATCATCAATGCTCATTTGAGCCTGTGGAATCATTCCAGCAAGGCTGCGGGTATAACAGTATAAACTTTGACGATGGAATGGATTTCTGGTACGACGTATTCATCAGATCAGGGGATTCGACAGAGTTGACGTTCTGA 798 0.4411 MVRAPCCEKMGLKRGPWTPEEDHLLVSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTAEEEETIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLQKTKQADQLINSETKTRGSKPHLIKRSVSSSSTVTTQSVSSSSTSSSDLLSSVFTLRESNGMNMCIKSEDMDSLEPILPQIEESFWSEAAMDDNSIAMNNELPAHHQCSFEPVESFQQGCGYNSINFDDGMDFWYDVFIRSGDSTELTF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0751 265 Gene3D - 68 143 - -
Prci4g0751 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci4g0751 265 CDD SANT 69 112 IPR001005 -
Prci4g0751 265 FunFam Myb transcription factor 11 67 - -
Prci4g0751 265 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Prci4g0751 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci4g0751 265 CDD SANT 16 61 IPR001005 -
Prci4g0751 265 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Prci4g0751 265 MobiDBLite consensus disorder prediction 121 162 - -
Prci4g0751 265 FunFam Transcription factor MYB15 68 146 - -
Prci4g0751 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 211 - -
Prci4g0751 265 MobiDBLite consensus disorder prediction 118 162 - -
Prci4g0751 265 Gene3D - 14 66 - -
Prci4g0751 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci4g0751 265 SMART sant 66 114 IPR001005 -
Prci4g0751 265 SMART sant 13 63 IPR001005 -
Prci4g0751 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci4g0751 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0751 Prci-Chr4 5038042 5040021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0751 1 254 MYB Transcription Factor Family AT2G31180 52.157 9.58e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g0751 Myb_DNA-binding 3.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0751 K09422 - gmx:100806975 320.472