Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0732 ATGGTCATGGATCACGTTATTGGCGGAAAATACAAGCTCGGGCGGAAGATTGGGAGTGGGTCGTTTGGCGAGCTTTATTTGGGCGTTAATGTGCAGAATGGAGAGGAAGTAGGTGTCAAGCTGGAACCTGCGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTTCAAGGAGGAACTGGCATACCCCATTTAAAATGGTTTGGAGTTGAGGGCGATTACAATGTCATGGTTATTGACCTTCTTGGTCCAAGTTTAGAAGACTTGTTTAACTATTGCAATAGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTTATAAATAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGCCGCAAAGCAAACCAGGTGTACATAATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTCCAAACACACAAGCACATACCATATAGGGAAAACAAGAATCTCACTGGAACTGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTTTGCAAGTCATATCCTTCAGAGTTTACATCTTACTTTCATTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATGCATACCTAAAGAGACTCTTTCGGGACCTGTTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATACTAAAATATCCACAAATTGGATCAAGTTCCAGATCACGGCAGCCAAGTGGGAAACAAGTTATGAACCAGGGACCATCTGCAGAGAGGGTAGAAAGGCCTTTAGTTGCACAAGAGACTCGGGAACGACTCCCAGGCTCTGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTAGTGATCATTCCAGGCACAGGTCTTCAGACGGTGTGCCCTCATCCAAAATAGTGCACCCTGATTCTGAGAGGGCTCGAAGCTCTTCTCGCACTGGTAGTGCCTCAAAAAGGCCTGTCGTGTCAAGCAGTAGGCCAAGCTCCTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCAGATTAGTGTCGAGCAGTGGCCGTCTATCGACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAGCATCAAGAGGTGGCCGTGATGATGCAATAAGGAGCTTTGAGCTTTTGTCAATTGGCACAGGGAAAAGGAAGTGA 1395 0.438 MVMDHVIGGKYKLGRKIGSGSFGELYLGVNVQNGEEVGVKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRQPSGKQVMNQGPSAERVERPLVAQETRERLPGSVEAFARRSGSGLLSDHSRHRSSDGVPSSKIVHPDSERARSSSRTGSASKRPVVSSSRPSSSGEPSESRASRLVSSSGRLSTTQRIQPGFESKSSSFTRATASRGGRDDAIRSFELLSIGTGKRK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0732 464 Pfam Protein kinase domain 11 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0732 464 MobiDBLite consensus disorder prediction 301 449 - -
Prci4g0732 464 MobiDBLite consensus disorder prediction 380 441 - -
Prci4g0732 464 FunFam Putative Casein kinase I 3 87 - -
Prci4g0732 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Prci4g0732 464 SMART serkin_6 11 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0732 464 CDD STKc_CK1_delta_epsilon 10 284 - -
Prci4g0732 464 SUPERFAMILY Protein kinase-like (PK-like) 6 292 IPR011009 -
Prci4g0732 464 FunFam Casein kinase 1-like protein 3 332 - -
Prci4g0732 464 MobiDBLite consensus disorder prediction 301 317 - -
Prci4g0732 464 MobiDBLite consensus disorder prediction 352 379 - -
Prci4g0732 464 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Prci4g0732 464 ProSiteProfiles Protein kinase domain profile. 11 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0732 464 PANTHER CASEIN KINASE-RELATED 9 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0732 Prci-Chr4 4897037 4903072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0732 10 215 MAP Kinase Kinase Kinase AT3G06030 25.000 6.49e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Prci4g0732 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0732 K08960 - mnt:21404312 791.571