Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0729 ATGGTCATGGATCACGTTATTGGCGGAAAATACAAGCTCGGGCGGAAGATTGGGAGTGGGTCGTTTGGCGAGCTTTATTTGGGCGTTAATGTGCAGAATGGAGAGGAAGTAGGTGTCAAGCTGGAACCTGCGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTTCAAGGAGGAACTGGCATACCCCATTTAAAATGGTTTGGAGTTGAGGGCGATTACAATGTCATGGTTATTGACCTTCTTGGTCCAAGTTTAGAAGACTTGTTTAACTATTGCAATAGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTTATAAATAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGCCGCAAAGCAAACCAGGTGTACATAATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTCCAAACACACAAGCACATACCATATAGGGAAAACAAGAATCTCACTGGAACTGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTTTGCAAGTCATATCCTTCAGAGTTTACATCTTACTTTCATTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATGCATACCTAAAGAGACTCTTTCGGGACCTGTTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATACTAAAATATCCACAAATTGGATCAAGTTCCAGATCACGGCCAAGTGGGAAACAAGTTATGAACCAGGGACCATCTGCAGAGAGGGTAGAAAGGCCTTTAGTTGCACAAGAGACTCGGGAACGACTCCCAGGCTCTGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTAGTGATCATTCCAGGCACAGGTCTTCAGACGGTGTGCCCTCATCCAAAATAGTGCACCCTGATTCTGAGAGGGCTCGAAGCTCTTCTCGCACTGGTAGTGCCTCAAAAAGGCCTGTCGTGTCAAGCAGTAGGCCAAGCTCCTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCAGATTAGTGTCGAGCAGTGGCCGTCTATCGACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAGCATCAAGAGGTGGCCGTGATGATGCAATAAGGAGCTTTGAGCTTTTGTCAATTGGCACAGGGAAAAGGAAGTGA 1392 0.4375 MVMDHVIGGKYKLGRKIGSGSFGELYLGVNVQNGEEVGVKLEPAKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRPSGKQVMNQGPSAERVERPLVAQETRERLPGSVEAFARRSGSGLLSDHSRHRSSDGVPSSKIVHPDSERARSSSRTGSASKRPVVSSSRPSSSGEPSESRASRLVSSSGRLSTTQRIQPGFESKSSSFTRATASRGGRDDAIRSFELLSIGTGKRK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0729 463 MobiDBLite consensus disorder prediction 301 316 - -
Prci4g0729 463 SMART serkin_6 11 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0729 463 FunFam Putative Casein kinase I 3 87 - -
Prci4g0729 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Prci4g0729 463 FunFam Casein kinase 1-like protein 3 331 - -
Prci4g0729 463 PANTHER CASEIN KINASE-RELATED 9 373 - -
Prci4g0729 463 MobiDBLite consensus disorder prediction 301 447 - -
Prci4g0729 463 CDD STKc_CK1_delta_epsilon 10 284 - -
Prci4g0729 463 SUPERFAMILY Protein kinase-like (PK-like) 6 292 IPR011009 -
Prci4g0729 463 MobiDBLite consensus disorder prediction 351 378 - -
Prci4g0729 463 Gene3D Transferase(Phosphotransferase) domain 1 1 337 - -
Prci4g0729 463 Pfam Protein kinase domain 11 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0729 463 ProSiteProfiles Protein kinase domain profile. 11 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0729 463 MobiDBLite consensus disorder prediction 379 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0729 Prci-Chr4 4897037 4903085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0729 10 215 MAP Kinase Kinase Kinase AT3G06030 25.000 6.69e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Prci4g0729 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0729 K08960 - cave:132177205 790.415