Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0673 ATGTTGCAGGATGTCATCCACGCTCCACCGCCACCTCCACCTCCACCCCAGGCGGAGCAGCAACTCACCAATATTGATGAAATCTCAAGCCCAATCAGTGCTCGAATTTTCGAGCTTTGCGACCCTGAATTGTTCCCTGAGACCCTCCAGAATTCTGAGGTTACCTCCAGCTCAAACTGTTGCTATGAAGAGAATTCCTCCTATGCCCCGAACATATCTCTAGCTTCAGATGTGGACAATAAGTTCAACAATAGCAATACAATCACCAACCCAACCAGCACAAATCCAACCAGCAGCGGTGCGGCTGCCGCCACCGCCGCCGCCGACAACAATAATACAGCCAACAATAGCAATCTGTCCATTGTCTTTGACTCCCAGGATGAAATTGACAATGACATTTCAGCCTCCATAGACTTCTCATCATCTCCTGCTGCTTTCCCTGTCCCTCCATTTCTGCCACTCACAACTCAACAGGACCAGCAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACACTCGCAGCCAGTTCAGTTGTGGAAGGCCTTGCACACTACGCCACTGACTCTGCTGTTGCACCTCTTATGGGGGCTTCATTAGCTTCTGTTTTTGAAGAGGATTGCTTATCTTCTGTCCCTTCTTATGTGCCTTTGAACCCTTCATCTCCTTCTTGCTCTTATCTCAACCCCGGTATAGGACCTTACATGCCTCTTGGTCCCCTTAATACTGCCTTATCTGCTGATAGTTCGGGGATATTTGGTGGGAGCATTCTCCTAGGCTCTGAACTTCAGGCACAGGAACTGGATTACCAGGGAGAAAATGGTACAATTTATTGTCCAGATTCAATTCAAAGGGTTTTCAATCCTCCAGACCTCCAGGCACTTAGTGCTGAGAATCAGCAACTTGTAGCTGGGGCTGGGAGTTCCACCACTTTGACACCAGAAATATCAAACTTGGAGGATTCTACCTTCAAGGTCGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCAGGCCTCGGGTCAGAGGAAGGTTTGCAAAGAATGATGATTTTGGAGATAATCACAGACCCGCTTGTAGCAATCACGAAGAAGATGATGAAGACGACGTGGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1296 0.463 MLQDVIHAPPPPPPPPQAEQQLTNIDEISSPISARIFELCDPELFPETLQNSEVTSSSNCCYEENSSYAPNISLASDVDNKFNNSNTITNPTSTNPTSSGAAAATAAADNNNTANNSNLSIVFDSQDEIDNDISASIDFSSSPAAFPVPPFLPLTTQQDQQFDFSSLQPQVTLAASSVVEGLAHYATDSAVAPLMGASLASVFEEDCLSSVPSYVPLNPSSPSCSYLNPGIGPYMPLGPLNTALSADSSGIFGGSILLGSELQAQELDYQGENGTIYCPDSIQRVFNPPDLQALSAENQQLVAGAGSSTTLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDNHRPACSNHEEDDEDDVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0673 431 MobiDBLite consensus disorder prediction 85 106 - -
Prci4g0673 431 ProSiteProfiles CCT domain profile. 333 375 IPR010402 GO:0005515
Prci4g0673 431 MobiDBLite consensus disorder prediction 372 390 - -
Prci4g0673 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 58 391 IPR045281 GO:0009909
Prci4g0673 431 MobiDBLite consensus disorder prediction 372 395 - -
Prci4g0673 431 Pfam CCT motif 333 375 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0673 Prci-Chr4 4580058 4584514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0673 313 377 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 7.54e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci4g0673 CCT 5.7e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0673 - - aprc:113871720 556.599