Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0654 ATGACACTGGGTTTACTAGTTGGTGGTGGTGGCAATGGTGGCTCTTCTGGGGCTACCCCAAATGAGTCTGCTGTGTCAAATGCTAAGGTTCTGGTACAAGAGTGCTCATCCTCGTACAAAGGTGAGGCTGAACTTGAACTGGGTTTGGGCCTGAGCCTCGGTGGTCGAGGCGGCGGCGGCGTCGGCAAGGCCAAGCCTTCTTCTGCATGGGGTGAGTGTGGTCGTATTTTGACGGCTAAAGACTTCCCTTCTGGTGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCGGATAGAGTCAGTACTGTGGGCGGTTCTGTTTCTGGGACTAAGAGAGCTGCCGACTCTGTCTCTCATGACGCTGGATCTCCCACTGCTGGCAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGCTCAGAGGGCTGAAGAAGACAAATCCAGCGGCGATAAGAACAATCTTGATGATGCTTCAGTCGCTAAAACTGGCACCTGCAACATGACTGAAAAAAACCATCTCGGATTTGTTAAGGTGAACGTGGATGGAATTCGCATTGGGAGAAAGGTAGACTTGAATTCTCATTCAAGCTATGAGAGTTTAGCTCAAACACTGGAAGACATGTTTTTCAAGCCTGCTTCAGCTGCTAAATCAGCAGCAGGTAGTGAGAAAGAACCTGGAACAAAAGCCTCTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTTCTCAGCTCAGTGAGAAGGCTTCGAATCATGAGAACATCTGAGGCTAATGGACTTGCTCCTAGATATCAAGAGAAACATGAGAGGCTGAGAATTAAACCCATTTAG 924 0.4816 MTLGLLVGGGGNGGSSGATPNESAVSNAKVLVQECSSSYKGEAELELGLGLSLGGRGGGGVGKAKPSSAWGECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVSHDAGSPTAGSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSSGDKNNLDDASVAKTGTCNMTEKNHLGFVKVNVDGIRIGRKVDLNSHSSYESLAQTLEDMFFKPASAAKSAAGSEKEPGTKASKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKHERLRIKPI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0654 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 44 290 IPR003311 GO:0005634|GO:0006355
Prci4g0654 307 MobiDBLite consensus disorder prediction 104 132 - -
Prci4g0654 307 MobiDBLite consensus disorder prediction 151 170 - -
Prci4g0654 307 Pfam AUX/IAA family 91 294 IPR033389 -
Prci4g0654 307 SUPERFAMILY CAD & PB1 domains 187 283 - -
Prci4g0654 307 Gene3D - 180 297 - -
Prci4g0654 307 ProSiteProfiles PB1 domain profile. 185 287 IPR000270 GO:0005515
Prci4g0654 307 FunFam Auxin-responsive protein 180 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0654 Prci-Chr4 4495534 4498565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0654 188 294 B3 DNA Binding Superfamily AT1G59750 31.776 1.71e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci4g0654 AUX_IAA 1e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0654 K14484 - qsa:O6P43_003143 364.385