Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0653 ATGACACTGGGTTTACTAGTTGGTGGTGGTGGCAATGGTGGCTCTTCTGGGGCTACCCCAAATGAGTCTGCTGTGTCAAATGCTAAGGTTCTGGTACAAGAGTGCTCATCCTCGTACAAAGGTGAGGCTGAACTTGAACTGGGTTTGGGCCTGAGCCTCGGTGGTCGAGGCGGCGGCGGCGTCGGCAAGGCCAAGCCTTCTTCTGCATGGGGTGAGTGTGGTCGTATTTTGACGGCTAAAGACTTCCCTTCTGGTGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCGGATAGAGTCAGTACTGTGGGCGGTTCTGTTTCTGGGACTAAGAGAGCTGCCGACTCTGTCTCTCATGACGCTGGATCTCCCACTGCTGGCAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGCTCAGAGGGCTGAAGAAGACAAATCCAGCGGCGATAAGAACAATCTTGATGATGCTTCAGTCGCTAAAACTGGCACCTGCAACATGACTGAAAAAAACCATCTCGGATTTGTTAAGGTGAACGTGGATGGAATTCGCATTGGGAGAAAGGTAGACTTGAATTCTCATTCAAGCTATGAGAGTTTAGCTCAAACACTGGAAGACATGTTTTTCAAGCCTGCTTCAGCTGCTAAATCAGCAGCAGCAGGTAGTGAGAAAGAACCTGGAACAAAAGCCTCTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTTCTCAGCTCAGTGAGAAGGCTTCGAATCATGAGAACATCTGAGGCTAATGGACTTGCTCCTAGATATCAAGAGAAACATGAGAGGCTGAGAATTAAACCCATTTAG 927 0.4822 MTLGLLVGGGGNGGSSGATPNESAVSNAKVLVQECSSSYKGEAELELGLGLSLGGRGGGGVGKAKPSSAWGECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVSHDAGSPTAGSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSSGDKNNLDDASVAKTGTCNMTEKNHLGFVKVNVDGIRIGRKVDLNSHSSYESLAQTLEDMFFKPASAAKSAAAGSEKEPGTKASKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKHERLRIKPI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0653 308 Gene3D - 180 298 - -
Prci4g0653 308 SUPERFAMILY CAD & PB1 domains 187 284 - -
Prci4g0653 308 MobiDBLite consensus disorder prediction 104 132 - -
Prci4g0653 308 FunFam Auxin-responsive protein 180 296 - -
Prci4g0653 308 MobiDBLite consensus disorder prediction 148 170 - -
Prci4g0653 308 Pfam AUX/IAA family 91 295 IPR033389 -
Prci4g0653 308 ProSiteProfiles PB1 domain profile. 185 288 IPR000270 GO:0005515
Prci4g0653 308 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 44 291 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0653 Prci-Chr4 4495534 4498568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0653 188 295 B3 DNA Binding Superfamily AT1G59750 31.481 2.15e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Prci4g0653 AUX_IAA 5.9e-63 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0653 K14484 - qsa:O6P43_003143 370.548