Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0632 ATGGATTCTCTTGTGCCATTTCAAGACCTCAATGACTTACCCGACCCATCCGCCTTTATGCCCAGTGGCAGCACCAATCCCATCAATGCCGGTGCTGCTACCCCCGCCATTTTGTTGGTCCCGAAATTGGAACCGAAGCTCGAGCCGTTGGACGAGCCGTGTCTGAACCATCGTCCCCAAGAACCCCAAGAAGTGGAGCGGACCATGTTTTCGAATCACGCCCTGGACGGGCTCTCTCCAGCGCAGCACAATAATTTTTGCGAGAATAGCCTGGCTTCCGCTGACACCCGGGGCGCATCGACGGAACGGGACAACTTGTATGCGGAGTTCTATCGATTTTCCGAGCAGTTTAGGAATATGTTAGCTAAGAGTTTAAACTCAAAGGGACATGGCGACGTTTTAGGACCAGATTCGCGAGCAATTGTTCCTGTGCCGCAGGAAAACCAGGTTCCTCCGGTGGTAGTTACTCCACGGCGGACGCCGCGGTTGAAGGAGCTGGTAAGGGTCAACGATCTTCGAATTGAAGATGACAGGTATTTTCGCGACATTACTAGAAGGACCAGGATGATTTATGATTCGTTGCGTGTTTTGTCAACGGTGGATGAGGAGAAGAAATGCGATTTTGCTACCCCCAGACGGCTGCGGGGTGATTTGAGGGCTGCTTCGCTAATGAGGGATCGTGGATTGTGGCTTAATCGTGATAAGCGGATCGTGGGTGCCATTCCAGGGATTTACATTGGCGACCTGTTCTTTTTTAGGATGGAACTAGTCGTGGTTGGGTTGCACGGTCAACCACAAGCTGGAATTGATTATCTCCCTTCTAGCCAGAGCACAAATGGGGAGCCGATAGCAACCAGTGTGATAGTTTCTGGTGGATACGAGGATGACGAAGATGGCGGGGATGTGATAATTTACACAGGTCATGGTGGCCAAGATAAGAATCATTCAAGGCAAGTTGTTCACCAGAAGTTAGAAGGAGGAAATCGTGCTATGGAAAGAAGCATGCATTATGGGATTGAAGTACGTGTTATTCGAGGGTTCAAATATGAGGGAAGTGTTTCTAGTAAAATTTACGTTTATGATGGCTTGTATAGAATTGTTCAATGCTGGTTTGATGTGGGTAAATCTGGATTTGGAGTTTACAAGTATAAACTTGTCAGAATTGAGGGCCAACCTGAAATGGGTAGTGCTATTCTTAGACTTGCTCAGACTCTTAGGACTCGTCCTTTGTCTATCAAGCCAATGGCTTATCTCAGTCTTGATATTTCTAACCAAAAGGAGAAGGTTCCTGTTCGTCTTTTTAATGACATAGATAGGGATCATGAGCCGCTTCGTTATGAGTATCTTTCACGGACTAATTTTCCACCATTTGTATTTCATCAAACTGGGAATACTACTGGTTGTGACTGTGTTGATGGTTGTGCTGATAACTGCTTCTGTGCTATGAAAAATGGCGGCCAATTTCCTTATAATCTAAATGGGATTCTTGTGAGAGGGAAGCCTATAATTTTTGAATGTGGCCCCTTCTGTCGTTGTCCTCCACATTGCCGAAATCGGATTACACAACATGGGCTGAAAAATAGACTGGAGGTGTTTAGGTCAAGGGAAACAGGTTGGGGAGTGAGGTCATTGGACCTTATTCATGCCGGTGCTTTTATCTGTGAATATGCTGGGGTTGTTCTGACCATGGAGCAAGCACAAATTTTGTCAATGAATGGTGATTCATTGATATATCCGAGTCGGTTTTCTAATAGGCAAGCCTCAGAATGGGGTGATTTATCTCAAATCTTCTCTGATTATGCGCGTCCATCTTATCCATCAATTCCTCCTTTGGATTTTGCGATGGATGTGTCCACAATGAGGAATGTTGCTTGCTATATGAGCCACAGTTCAATTCCTAATGTGTCGGTTCAGTTTGTGCTGTATGATCACAATAATTTGATGTTCCCTCACCTTATGCTATTTGCATTGGAGAACATTCCTCCAATGAGGGAGCTCAGCCTTGATTACGGGGTGGCTGATGAATGGACAGGAAAGCTTTCTATATGTAATTGA 2055 0.4564 MDSLVPFQDLNDLPDPSAFMPSGSTNPINAGAATPAILLVPKLEPKLEPLDEPCLNHRPQEPQEVERTMFSNHALDGLSPAQHNNFCENSLASADTRGASTERDNLYAEFYRFSEQFRNMLAKSLNSKGHGDVLGPDSRAIVPVPQENQVPPVVVTPRRTPRLKELVRVNDLRIEDDRYFRDITRRTRMIYDSLRVLSTVDEEKKCDFATPRRLRGDLRAASLMRDRGLWLNRDKRIVGAIPGIYIGDLFFFRMELVVVGLHGQPQAGIDYLPSSQSTNGEPIATSVIVSGGYEDDEDGGDVIIYTGHGGQDKNHSRQVVHQKLEGGNRAMERSMHYGIEVRVIRGFKYEGSVSSKIYVYDGLYRIVQCWFDVGKSGFGVYKYKLVRIEGQPEMGSAILRLAQTLRTRPLSIKPMAYLSLDISNQKEKVPVRLFNDIDRDHEPLRYEYLSRTNFPPFVFHQTGNTTGCDCVDGCADNCFCAMKNGGQFPYNLNGILVRGKPIIFECGPFCRCPPHCRNRITQHGLKNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQILSMNGDSLIYPSRFSNRQASEWGDLSQIFSDYARPSYPSIPPLDFAMDVSTMRNVACYMSHSSIPNVSVQFVLYDHNNLMFPHLMLFALENIPPMRELSLDYGVADEWTGKLSICN 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0632 684 SUPERFAMILY SET domain 408 683 IPR046341 -
Prci4g0632 684 SMART set_7 527 677 IPR001214 GO:0005515
Prci4g0632 684 Pfam SET domain 538 671 IPR001214 GO:0005515
Prci4g0632 684 Gene3D SET domain 396 684 IPR046341 -
Prci4g0632 684 ProSiteProfiles Pre-SET domain profile. 466 524 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci4g0632 684 Pfam Pre-SET motif 422 519 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci4g0632 684 ProSiteProfiles PUA domain profile. 330 348 - -
Prci4g0632 684 Gene3D - 236 395 IPR036987 -
Prci4g0632 684 ProSiteProfiles SET domain profile. 527 671 IPR001214 GO:0005515
Prci4g0632 684 MobiDBLite consensus disorder prediction 1 26 - -
Prci4g0632 684 Pfam SAD/SRA domain 238 391 IPR003105 -
Prci4g0632 684 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 82 684 IPR025794 GO:0016571
Prci4g0632 684 ProSiteProfiles YDG domain profile. 239 387 IPR003105 -
Prci4g0632 684 SMART preset_2 419 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci4g0632 684 SUPERFAMILY PUA domain-like 220 399 IPR015947 -
Prci4g0632 684 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 159 672 - -
Prci4g0632 684 SMART G9a_1 234 391 IPR003105 -
Prci4g0632 684 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 221 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0632 Prci-Chr4 4406024 4414889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0632 158 673 Su(var)3-9 homologs AT5G04940 39.360 4.53e-109 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci4g0632 SAD_SRA 2.1e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0632 K11420 - pvy:116108901 962.985