Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0631 ATGTATTGGGGAGGCATGGCTGGGAACAACATGGGTTGGGGTATGAACATGATAGAGGAAGAGGGTTGGAGGAAAGGTCCCTGGACTGCTGAAGAAGATAGATTGCTTATTGAATATGTTAGGCTTCATGGTGAAGGCAGATGGAACTCCGTCTCCAGGCTTGCGGGATTGAAAAGAAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTACTTGAGGCCTGACCTCAAGAAGGGTCAGATAACACCTCAGGAAGAGAGTATCATTCTAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCTACAATTGCAAGAAGTTTACCAGGAAGAACTGACAATGAGATTAAAAACTATTGGCGGACCCATTTCAAGAAGAAGGCAAAAAATTCCCCGGATTCTGCAGAAAAAGCGAAAAATCGCCTTATAAGGAGGCAACAGTTTCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAACAACAGCAGCTGCAGCAACTGCAATTCAACTTGGACATCAAAGGGATTATGGCTCTTCTGGAGGAACATGATCATAGAGTGGCCATGCCTTCTTTATCTCAGATGAGGCAAGAAATGTACCAAAACACCATAGAAGAGCAAGGGTGGTTCTACTCTATGATCAATGGCAATGCCCCTGCACCAGAACCCTCAAACGATGATACTTTCTGGGATGGCCTGTGGAACATGGATGATCTTCATGGAAATTTCAGTGCAGCAAACAAAGCCAATCTGCACAGTCTAGTTGCTCCCTTCTGCTAG 774 0.4638 MYWGGMAGNNMGWGMNMIEEEGWRKGPWTAEEDRLLIEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNSPDSAEKAKNRLIRRQQFQQQQQQQQMQQQQQLQQLQFNLDIKGIMALLEEHDHRVAMPSLSQMRQEMYQNTIEEQGWFYSMINGNAPAPEPSNDDTFWDGLWNMDDLHGNFSAANKANLHSLVAPFC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0631 257 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Prci4g0631 257 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Prci4g0631 257 SMART sant 77 125 IPR001005 -
Prci4g0631 257 SMART sant 24 74 IPR001005 -
Prci4g0631 257 CDD SANT 27 72 IPR001005 -
Prci4g0631 257 FunFam MYB transcription factor 82 163 - -
Prci4g0631 257 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 207 IPR044676 GO:0003700|GO:0006355|GO:0043565
Prci4g0631 257 Gene3D - 82 126 - -
Prci4g0631 257 Pfam Myb-like DNA-binding domain 78 122 IPR001005 -
Prci4g0631 257 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Prci4g0631 257 FunFam Myb transcription factor 25 77 - -
Prci4g0631 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 72 IPR017930 -
Prci4g0631 257 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Prci4g0631 257 Gene3D - 25 77 - -
Prci4g0631 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Prci4g0631 257 CDD SANT 82 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0631 Prci-Chr4 4370754 4372326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0631 20 257 MYB Transcription Factor Family AT4G13480 54.198 1.37e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci4g0631 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0631 K09422 - gmx:100795981 359.377