Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0624 ATGGCTAGCTTCATGATAACCTCTATCCTGCGTTTGATGTTTTTTGTACAACTTTCTTATTCTTCTTCTTCTTCGTCTCATCATCATGGACGCGTAATAGTGGTGTCAAAGGATGGGGATGGAGATTACGCGAGTATAAGTGAAGCAATAGCACGAGCTCCGAGGCTGAGTGGAAAGAGAATCAGAATAGAGATCAAAGCTGGAATCTACGAGGAATATCTCAGAATCCCCTCCGACAAGACCAACATCGTCCTCGTCGGAAGCGGCACCCAAATTACAAGGATTACTGGCAATCGAACCACAGCCACCGATCAAAGTGCCACACTAGCGATCTATGGATCAGGGTTCGTGGCCGAACACCTAGGATTTGTGAACACCGCAGGGAGCGATGCCGGCCCCGGAGTGGCCGTATTCAACCAGGCCGATCACAGCGCCTTTTACAGATGCTCCATCGAAGGCTTCCAAGACACCCTGTGGGCCGTCTCTGGCCGCCAATTCTACCGCGATTGCGACATCTACGGCACCGTCGACTTCATCATGGGCGACGCCGCCGCTCTCTTCCAGAACTGCAACCTCTTCGCCAGGCCTAGGGAGTTCGTCACCTTCACCGCCCAGTCTCGCTCCTCCGACAGTGAAGCTACCGGCTTCGTCTTCCAGTCCTGCCATTTCACCATATCCCCGAAGGACGCAGATCAGAAGTCGAGGGTGGTCAGAGCGACGTTAGGGAGGCCGTGGAGGGCGTATTCGAGGGTGGTGATAATGGAATCGTACATCGATTCACTGATTGATCCGAAAGGGTGGGAGATTATGTATGGCACGGCGCGTACGGACAGGTTGAGCTACATAGAGTATAAGAATAAAGGGCCGGGGGCGAGGACTGGTGATAGAGTGAAGTGGCCTGGGGTTAGGGTTGCGGCTGATCCGATGGAAGTTGAAGGGTTCGCTGCTTCTGCGTTTCTGGACGGCAATGCTTGGATTCCTCAACTTCGGATTCCATATCGTCCAGGTCTCTAG 1014 0.5316 MASFMITSILRLMFFVQLSYSSSSSSHHHGRVIVVSKDGDGDYASISEAIARAPRLSGKRIRIEIKAGIYEEYLRIPSDKTNIVLVGSGTQITRITGNRTTATDQSATLAIYGSGFVAEHLGFVNTAGSDAGPGVAVFNQADHSAFYRCSIEGFQDTLWAVSGRQFYRDCDIYGTVDFIMGDAAALFQNCNLFARPREFVTFTAQSRSSDSEATGFVFQSCHFTISPKDADQKSRVVRATLGRPWRAYSRVVIMESYIDSLIDPKGWEIMYGTARTDRLSYIEYKNKGPGARTGDRVKWPGVRVAADPMEVEGFAASAFLDGNAWIPQLRIPYRPGL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0624 337 Pfam Pectinesterase 33 323 IPR000070 GO:0030599|GO:0042545
Prci4g0624 337 FunFam Pectinesterase 4 30 337 - -
Prci4g0624 337 PANTHER PECTINESTERASE 32 327 - -
Prci4g0624 337 Gene3D - 27 337 IPR012334 -
Prci4g0624 337 SUPERFAMILY Pectin lyase-like 29 335 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0624 Prci-Chr4 4341209 4343288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0624 33 337 Carbohydrate Esterase AT2G26440 45.192 1.21e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0624 - K01051 gmx:102665195 334.339