Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0623 ATGAGAAGTGCAAGTCGATGGATAAGATTTACCAGATATTGTTTCTATATGATCCCCAGCAAGTGCGTTCTTGTGTTTGGACTCCCAAGACAATATCAGAAACACGCGGTCCCCAAAGGATCTGCATCAACCTCAGTTCTGCTCATTCTCTCATCACCATTGTCGTCGGCTTCTTCGTCGGCTTCTTCTTCTGCAGTTACAGTGTCCATTGATGGCCGAGGAGATTACACCACAATCGGCCAAGCCATTGCAGAAGCTCCTTCCAACAGCGACGCAAAATACACCATCCTCGTTCGACCTGGAATCTACGAGGAGCGTCTCCACATTCCCCGCGACAAAACCAACATACTTCTCATCGGCAACGGTCGCCATGATACTGTCATTCTCGGACACCACAATGGTGGCATGCTGTCTCAAACAGCCACAGTAGCAATTCAAAGAGCAGGCTTCGTGGGCCAGGGAATAGCCTTTGTCAACTCAGCTGGGCCGAAAGCGGGCCCATGCCTAGCTCTCCTGAACACGGCGGACAGGTCCGTGTTGCACAACTGCTCCATCGAGGGCTTCCAGGACACCTTGTGGGCCTCATCAGGCCGTCAATTTTACCGGGAATGCGACATCTACGGCTCCGTCGACTTCGTCATGGGAAACACCGCCGCCGTCTTCCAGAACTGCGTGCTCTACACCCGCCTCGCCGGCTTCTCCGTCTTCACTGCGCAGTCTCGTGACGACCCCCTGGAACGCACCGGTTTCGTTTTCCAGTACTGTCGTTTCACGGCGTCTACAGAGGACTCCGGGAAGCAGTTATCCGGTGCGGGCAGGGCAATTTTAGGACGGCCGTGGAGGGCGTATTCGAGGGTGGTGATCATGCGGGCGTACATAGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGGAGGGGACGCCCACCGATAAGGCGAGTTACATAGAGTTCGAGAATGAAGGGTCTCGATCGAGCACACGTGGCAGAGTGAGGTGGGTTGGTGTGGTGGAGGTGCCGGATGCGGATCAGGTGAGGGAATTCACTGTGTCCAGGTTCATAAAAGGTGACGCTTGGATTCCTCAAACTGGGGTTCCATACATTGGAGGATTATAA 1116 0.5403 MRSASRWIRFTRYCFYMIPSKCVLVFGLPRQYQKHAVPKGSASTSVLLILSSPLSSASSSASSSAVTVSIDGRGDYTTIGQAIAEAPSNSDAKYTILVRPGIYEERLHIPRDKTNILLIGNGRHDTVILGHHNGGMLSQTATVAIQRAGFVGQGIAFVNSAGPKAGPCLALLNTADRSVLHNCSIEGFQDTLWASSGRQFYRECDIYGSVDFVMGNTAAVFQNCVLYTRLAGFSVFTAQSRDDPLERTGFVFQYCRFTASTEDSGKQLSGAGRAILGRPWRAYSRVVIMRAYIDDIVSPMGWGEMEGTPTDKASYIEFENEGSRSSTRGRVRWVGVVEVPDADQVREFTVSRFIKGDAWIPQTGVPYIGGL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0623 371 Gene3D - 63 371 IPR012334 -
Prci4g0623 371 FunFam Pectinesterase 4 62 371 - -
Prci4g0623 371 SUPERFAMILY Pectin lyase-like 59 370 IPR011050 -
Prci4g0623 371 Pfam Pectinesterase 66 357 IPR000070 GO:0030599|GO:0042545
Prci4g0623 371 PANTHER PECTINESTERASE 64 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0623 Prci-Chr4 4335371 4336788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0623 63 371 Carbohydrate Esterase AT4G02330 42.006 1.96e-79 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0623 K01051 - gmx:102665195 291.582