Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0608 ATGGTTACGACAATCAATTTCAGAGTTGGAACTCAAGTTTTTGTCGAGGACCCTGAGGTAGCTTGGATAGATGGAGAAATTGTGGAAACTAACGGCGAGGAGATCAAAGTTATGTGTACATCAGACAAGACGGTTGTGGTCAAAACATCCAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTTCTGGTGTAGATGATATGACAAGGCTGGCATATCTGCATGAGCCAGGGGTTCTCCAGAATTTGCAATGTCGATATAACACCAATGAAATATATACATACACAGGAAATATATTGATTGCTGTGAACCCTTTTCAAAGATTACCTCAACTCTATGGCCGCGATGTGATGGAAAAGTATAAAGGATCAGCGATTGGTGAACTGAGCCCACATCCGTTTGCAATTGCTGATTCTGCATATAGGATGATGTTAAATGAAGGAACAAGCCAATCAATTTTAGTCAGTGGAGAAAGTGGAGCTGGCAAAACAGAGAGCACAAAGATGCTTATGCATTATCTTGCCTATATGGGCGGGAGAAAGGAATCTGAGGGACGATCTGTGGAGCAGCAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTCGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGATTTGGGAAGTTTGTGGAGCTACAGTTTGATCAAAGGGGGAGAATTTCAGGAGCTGCTATTAGAACTTATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCAGACCCTGAGAGAAACTACCATTGTTTTTATATGATTTGTGCTGCACCAGAAGAGGATATTAAAAGGTACAAATTGGAAAATCCAAGAACATATCATTACCTAAACCAATCCAATTTCTTTGAGTTGGATGGATTGGATGAATCCAAGGAGTACCTTGCAACTAGGAGAGCTATGGAGGTTGTGGGTATCACTTCTGATGAGCAGGATGCTATATTCCGAATAGTAGCTGCAATACTTCATTTAGGAAACATTGAATTTGCGAAGGGGGACGAGCCGGATTCCTCTGAACCAAAGGATGATCAATCTCGTTTTCACCTGAAAACTACAGCTGAACTTTTGAAGTGCGACGAGAAGTCACTTGAGGACTCCTTGTGCAAACGTGTTATGGTAACACGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTTGGCAGCTCTCAGTAGAGATTCATTGGCCAAAATAGTTTACTCAAAGCTGTTTGACTGGATTGTGAAAAAGATTAATAACTCTATCGGTCAGGATCCAAATTCGAAGAACTTAATTGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTCTGTATCAACCTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAACTGGAGCTATATAGAGTTCATTGATAATCAGGATGTTCTTGATCTCATCGAGAAGAAACCTGGCGGCATCGTTGCTCTTCTTGATGAGGCTTGTATGTTTCCAAGATCAACACATGAAACATTCGCGGAAAAGTTATATCAAACTTTTAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGATTTCACCATCTGCCACTATGCTGGTGATGTTACTTATCAGACTGATTTGTTCCTAGACAAGAACAAAGACTACGTTGTTCCAGAGTTTGAGGCACTACTCGGCGCTTCAAAGTGCTCCTTTGCTTCAGGGTTGTTTCCACCTCAACCTGAGGAAACTTCCAAATCATCAAAGTTCTCCTCAATAGCCACCCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACTCTGAATGCTACTGAGCCACATTACATTCGTTGCATAAAGCCAAATAATCTTCTCAAACCAAGGATATTTGAGAACACTAATGTGTTACAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATACCCGACTAGAAAGCAATTTGATGAGTTTGTTAAGCGGTTTGCAGTTCTGGCACCTGATGCTCTTAAAGGATGCTGTGATGAGAGGACTGCTTGCGTGAAGCTGCTAGGTAAAGTAAATCTTGAAGATTATCAGGTGGGCAAGACTAAAGTGTTTCTGAGAGCAGGACAGATGGCAAAACTAGATGCATGTCGTGCTGAGGTCTTGGGACGATCTGCAACCACTATTCAGTGTAAAGTCCGCTCATTTTTTGGTCACAAAAAATATGTTCTGTTGCGGTTGTCTGCCATACTACAAACGATCTGTAGAGGAGAACTTGCTCGCTGTCTGTGCGAGAAAATGAGGAGGGAAGCTGCTGCTTTAAAAATTCAAAAGAATGGTCGCATGTATATTGCTAGATCATCTTATAAAACTTTGCGTGCCTCAGCCGTTTCCATTCAAACTGGCATGCGATGCATGGCTGCTAGAGATGAGCTCCAATGCAGAAGGCGAACGGAAGCTACAATTGTCATCCAAAGCCACTGCCGAGGTTATGTAGCCTACATTCAACTCCTGAGGCTAAGGGAAGCAGCAATCATTATCCAGTGTGCCTCGAGGGGACAAATGGCCCGTAAAGAACATCGGAAACTTCAAATGGCTGCTAGGGAAACCGGTGCTCTCAAAGCTGCCAAAGAAAATCTTGAAAAGGAAGTTGAAGAATTAAATTCTTGTCTACAAATGGAGAAGAAGATGGTGGCTGATGTTGAACAGGAAAACGCAAAATTGAAATCTGCCTTGGAAGAGACTAAGGAGGAAAAGGCAAAATTGAAATCTGCCTTGGAAGAGACTAAGGAGGAAAATTCAAAATTGCAATCTGCTTTGGAAGAGATTAAGGCGGAAAATGCAAAATTGCAAACTTCCCTGGAAGAGACTAAGGCATTGCACTTTCAGGAGGGCCAGAGACCAAAAGTTTGGGTGAACCAAATTCATACGGACGAATGTACTGTTGTTGATACTGATTTTATCAAGAAGTTAACAGCAGAAAACGACCATCTCAAGGCATTGGTTAAGTCATTGGAAAAGAAAGTTAATGACACCAAAAAGAAAATTGATGAAACTAAAAGACTTAGTGAAGAACGCTTGAAGCAAGCGTCAGAAGCTGAAACTAAAGTAATTGAGTTGAAGATGGCTATGCAGAGGCTTGAAGAAAAACTCTCTGATATAGAAACAGAGGATCAAATTTTGAGGCAGCAGGCTCTACTGAGTTCATCTTCTAGGAGAATGTCAGGGCATTTATCCTTTTCTAAATCTCAGCCTTCAGAGAACGATCAAGATAGTACTCCGAGAAAAAAATTTGGTACAGAGGCGGATAAAGAGTTGAGGAAATCTCAAGTTGAAAGACAACAAGAGACTGTAGATGCTCTTCTGAAATGTGTGGCAGAAGCAGACCTTGGGTTCAGCGAAGGGAAACCAGTTGCAGCTTATACCATTTACAAGTGTTTGCTGCACTGGAGATCTTTTGAAGCAGAAAAGACAAGTGTATTTGATCATCTTATTCAGATGGTTGGTTCTGCTATAGAGGATCAGGACAATAGTGATCACATGGCTTATTGGTTATCCAATACATTTGCATTGTTTTTTCTTCTTCAGCAAAGTCTCAGACCACCTTCAGCACAGAAACCTCCACCCCCTGCAACATCTTTTTTTGGAAGGATTTCCCAAAGTTTTCGTTCATCAACTGCTGGTACTGCACTTGATAACATTCGCCAAGTCGATGCTAAGTACCCAGCTCTGCTTTTCAAACAGCAACTTACAGCATACGTGGAAAAAATTCATGGAATTGTTCGAGAGAATTTGAAGAAGGACTTATCGCCTCTGCTTACTTGCATTCAGGCACCTAAAACATCAGAGCAAAGCATATCAGATGAACAGTCAAATGATAATAGCACCCCAGCGGGTTCTTGGCAGAATATTATTGATTGCCTTAACAAATTTCTCAATACGATGAAAGAAAAACATTTGCCTCCTGTTCTAGTTCAGAAGATATTGAATCAGGTTTTCCAGTACATCAATGTGCAACTCTTTAATAGCCTCCTTTCAAATAAAGAATATTGCACATTTACCAATGGAAAATTTCTAAAAGTGGGGTTGGAGGAACTAGAAAAATGGTGTGGTGAAGCCACAGAAGAGTATGCTGCTTCATGTTGGGATGAACTCAAACATGTGAGGCAAGCAGTTGGATTCTTGGCTAAAAATGAGAAGACCACAATATCCTATGATGATCTCACTAACGATATCTGTCCGATCCTGAGTGTTCATCAGCTTTACAAAATTTGTTTACTTTACGGGGATGGTAGTGACAGTGAACAATGCGTATCGACAGACGTCACTACTAGGTTGAAACTTCTAATGACAGATGATGCAAATGACGACAGCGACTCCTTCGTGTTGGACGATAATTCAAGTATCCCATACTCAGTTGATGAGATTTCAAATTCCTTCCAAGGAAACAACTCATTAAAAGTACAAGCGCCAGCAGAACTACTTAAGAATTCAGCCTTCCAATTTTTACAAGATTGA 4557 0.4097 MVTTINFRVGTQVFVEDPEVAWIDGEIVETNGEEIKVMCTSDKTVVVKTSNVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQCRYNTNEIYTYTGNILIAVNPFQRLPQLYGRDVMEKYKGSAIGELSPHPFAIADSAYRMMLNEGTSQSILVSGESGAGKTESTKMLMHYLAYMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDIKRYKLENPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGITSDEQDAIFRIVAAILHLGNIEFAKGDEPDSSEPKDDQSRFHLKTTAELLKCDEKSLEDSLCKRVMVTRGEAITKWLDPNLAALSRDSLAKIVYSKLFDWIVKKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIVALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTDLFLDKNKDYVVPEFEALLGASKCSFASGLFPPQPEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLKPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFAVLAPDALKGCCDERTACVKLLGKVNLEDYQVGKTKVFLRAGQMAKLDACRAEVLGRSATTIQCKVRSFFGHKKYVLLRLSAIQXQTICRGELARCLCEKMRREAAALKIQKNGRMYIARSSYKTLRASAVSIQTGMRCMAARDELQCRRRTEATIVIQSHCRGYVAYIQLLRLREAAIIIQCASRGQMARKEHRKLQMAARETGALKAAKENLEKEVEELNSCLQMEKKMVADVEQENAKLKSALEETKEEKAKLKSALEETKEENSKLQSALEEIKAENAKLQTSLEETKALHFQEGQRPKVWVNQILXTDECTVVDTDFIKKLTAENDHLKALVKSLEKKVNDTKKKIDETKRLSEERLKQASEAETKVIELKMAMQRLEEKLSDIETEDQILRQQALLSSSSRRMSGHLSFSKSQPSENDQDSTPRKKFGTEADKELRKSQVERQQETVDALLKCVAEADLGFSEGKPVAAYTIYKCLLHWRSFEAEKTSVFDHLIQMVGSAIEDQDNSDHMAYWLSNTFALFFLLQQSLRPPSAQKPPPPATSFFGRISQSFRSSTAGTALDNIRQVDAKYPALLFKQQLTAYVEKIHGIVRENLKKDLSPLLTCIQAPKTSEQSISDEQSNDNSTPAGSWQNIIDCLNKFLNTMKEKHLPPVLVQKILNQVFQYINVQLFNSLLSNKEYCTFTNGKFLKVGLEELEKWCGEATEEYAASCWDELKHVRQAVGFLAKNEKTTISYDDLTNDICPILSVHQLYKICLLYGDGSDSEQCVSTDVTTRLKLLMTDDANDDSDSFVLDDNSSIPYSVDEISNSFQGNNSLKVQAPAELLKNSAFQFLQD 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0608 1520 Pfam DIL domain 1343 1443 IPR002710 -
Prci4g0608 1520 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 MobiDBLite consensus disorder prediction 1104 1126 - -
Prci4g0608 1520 FunFam Myosin heavy chain 252 307 - -
Prci4g0608 1520 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 CDD MYSc_Myo11 76 720 IPR036018 -
Prci4g0608 1520 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Prci4g0608 1520 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 SMART iq_5 757 779 IPR000048 GO:0005515
Prci4g0608 1520 SMART iq_5 853 875 IPR000048 GO:0005515
Prci4g0608 1520 SMART iq_5 830 852 IPR000048 GO:0005515
Prci4g0608 1520 SMART iq_5 782 804 IPR000048 GO:0005515
Prci4g0608 1520 SMART iq_5 805 827 IPR000048 GO:0005515
Prci4g0608 1520 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Prci4g0608 1520 Pfam IQ calmodulin-binding motif 832 847 IPR000048 GO:0005515
Prci4g0608 1520 Pfam IQ calmodulin-binding motif 855 875 IPR000048 GO:0005515
Prci4g0608 1520 Coils Coil 877 974 - -
Prci4g0608 1520 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 PANTHER MYOSIN 54 1434 - -
Prci4g0608 1520 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Prci4g0608 1520 Coils Coil 1003 1079 - -
Prci4g0608 1520 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Prci4g0608 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 883 IPR027417 -
Prci4g0608 1520 ProSiteProfiles Dilute domain profile. 1177 1467 IPR002710 -
Prci4g0608 1520 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 FunFam Class V myosin 439 576 - -
Prci4g0608 1520 CDD MyosinXI_CBD 1127 1489 IPR037975 GO:0007015
Prci4g0608 1520 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Prci4g0608 1520 FunFam unconventional myosin-Va 834 881 - -
Prci4g0608 1520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 785 IPR027417 -
Prci4g0608 1520 Gene3D Kinesin motor domain 65 662 IPR036961 -
Prci4g0608 1520 MobiDBLite consensus disorder prediction 1089 1126 - -
Prci4g0608 1520 Gene3D - 667 730 - -
Prci4g0608 1520 SMART DIL_2 1342 1449 IPR002710 -
Prci4g0608 1520 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci4g0608 1520 FunFam unconventional myosin-Va 785 833 - -
Prci4g0608 1520 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Prci4g0608 1520 FunFam Myosin 2 312 428 - -
Prci4g0608 1520 Gene3D - 439 623 - -
Prci4g0608 1520 Gene3D - 252 310 - -
Prci4g0608 1520 Gene3D - 735 785 - -
Prci4g0608 1520 Gene3D - 786 832 - -
Prci4g0608 1520 Gene3D - 833 882 - -
Prci4g0608 1520 MobiDBLite consensus disorder prediction 1089 1103 - -
Prci4g0608 1520 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0608 Prci-Chr4 4214909 4232002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0608 1 1519 Myosins gene family AT5G43900 63.442 0.0 1961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0608 K10357 - mnt:21394610 2063.11