Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0586 ATGAATCTTTCCGGAACACTAAATCCTAGCATTGGAGGTCTGACGCATCTAACTTATCTCAATCTTGCCGACAATGGGCTGATGGGAAATATACCCAATGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTTCTTGAACAATAATCGATTCAGGGGACAAGTTCCTGCTGAATTGGGGAAGCTTTCCCTTCTGAGGCGTTTGAATATTTGCAACAACATAGTCTCAGGTTCTCTGCCAGAAGAATTGGGAAACCTGTCTTCGCTGGTTGAGCTTGTGGCCTACACAAATAATCTGTCCGGTCCCCTGCCTCGTTCTATTGGAAATCTCAAGAGTCTCACTACTTTGAGAGCCGGGGGGAATAGATTGTCAGGTAGCTTGCCAAGTGAGATCGGTGGATGTAGGAGCATGGAATTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTGCCGACAGAGATTGGGATGCTTCAGAACTTAAGAGAACTGGTTTTGTGGAATAACCAGTTATCAGGGCTTATTCCTAAAGAGCTTGGGAATTGTACCAGCCTTGAAACCCTTGCTTTCTATGGAAATGCTCTTGTTGGACCTATACCTGAGGAGATTGGGAATCTCAAGTCTCTGGGGAGGTTGTACCTTTACAGAAATAAATTGAATGGCACCATTCCAAGGACGATTGGGAATCTTTCTCTGGCATTAGAAGTTGATTTCTCAGAAAACTCTTTGGTGGGAGATATTCCTCCTGAGATCAGCAAAATAAGTGGTCTCCACTTGCTCTTTCTCTTTGAAAACGAGCTATCCGGTGTTATACCCAACGAGTTTAGTAGCTTAAGGAACCTGACAAGGCTGGACCTGTCCATTAATAATCTCACCGGTCCAGTTCCGTGGGGGTTCCAGTACTTGACTCGAATGTCTCAGTTGCAACTTAATGACAACTCTCTAACTGGAAATATTCCCCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTAACAATCACTTGACAGGAACGATACCTCCCCATCTATGTCGAAATTCGAACTTGATGTTGTTGAATCTGGCTTCTAATCGACTTTATGGAAATATACCAACTGGCATCCTGAATTGTGAAACGTTGGCACTGCTACTGCTGGTTGGAAATAGTCTTACTGGTGGCTTCCCTTCACAGCTGTGCAAACTAGTGAACCTTACTGCCGTTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCTGAGGTCGGGAGGTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTATAGAAATAGGAAACCTTTCTCAATTGGTGACCTTCAATGTTTCATCCAATTCTTTCATTGGACCTATCCCGCATGAAATTGTTAGATGCAAGAAGCTTCAGCGACTTGATCTCAGCCGCAACAGCTTTGCTGGTCCCCTGCCAGATGAGCTTGGAACACTCTCTCAGTTGGAGCTTCTCAAGCTTTCAGATAATAAGCTTACAGGGCATATCCCTCCAACATTAGGTAATCTGCGTCGTCTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGAGAAATACCTCCTGATTTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAATAATCTCATTGGAAGTATACCTGATAAGCTGGGCAATCTCTATATGCTTGAGTTTCTCCTTCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGTTTGATGGGGTGTAATTTCTCATACAACAATCTCTCTGGACCTATACCTTCCATTCCACTATTTGGAAATATGGAAATTAGCAGCTTTGTTGGTAACAATGGCCTCTGCGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTCTCTTTCTGATCCTCCTATGCAAAATGTTAATGCTTCTCGCACCAAGATGATCACTATTGTTGCAACAGTTGTTGGTGGCGTTGCTCTCGTTCTAATAGTAATCATTTTATATTTTATGAGACGTCCTCCTGAGCCTATTTCTTCGCTGAGGGATTCTGAGATTCCGACCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACCAACAACTTTCATGACAGTTATGTCATTGGAAGAGGGGCTTGCGGAACAGTTTATAAGGCAGTGATGCCATCATCCGGAAAGACTATTGCTGTTAAGAAGTTAGCATCCAACAGGGAAGGGAACAACATCGAGAATAGCTTCCGGGCTGAAATATTAACTCTTGGAAAGATAAGGCACCGAAATATAGTGAAGTTGTATGGGTTTTGCTATCACCAAGGTAGCAATCTCCTACTATACGAGTACATGGCAATGGGTAGCCTAGGGGAGCAACTTCATGGATATGCATGTACTTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGCGATATAAAATCGAATAACATTCTACTTGATGAAAACTTTGAGGCCCACGTGGGTGACTTTGGTTTGGCGAAAGTTATTGACATGCCTCAATCAAAATCAATGTCAGCAGTTGCTGGATCATATGGTTATATTGCTCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGATATCTATAGCTATGGAGTTGTGCTGCTGGAGCTGCTTACAGGAAGAACTCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAACTACATTCGGAGCCATAACAACAAGCTGTCGTCTGGTGTGCTCGACAATCGTCTCAATCTCCAAGATCAAACCACCGTGAACCACATGCTCACCGTTCTAAAAATTGCTTTGCTCTGCACAAACATGAACCCTACTGATCGGCCATCGATGCGCCAGGTCGTGTTGATGCTTATAGAATCCAACGAGCGAGAAGGAAACCTGGCCACTTCTCCATCTCAGTTTGAGAATCTTGCTTCCAAAGAAGACGACGAGCAAGAGAGTACGTGA 3087 0.4383 MNLSGTLNPSIGGLTHLTYLNLADNGLMGNIPNEIGNCSSLEFLFLNNNRFRGQVPAELGKLSLLRRLNICNNIVSGSLPEELGNLSSLVELVAYTNNLSGPLPRSIGNLKSLTTLRAGGNRLSGSLPSEIGGCRSMEFLGLAQNQIGGELPTEIGMLQNLRELVLWNNQLSGLIPKELGNCTSLETLAFYGNALVGPIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSLALEVDFSENSLVGDIPPEISKISGLHLLFLFENELSGVIPNEFSSLRNLTRLDLSINNLTGPVPWGFQYLTRMSQLQLNDNSLTGNIPQSLGLYSPLWVVDFSNNHLTGTIPPHLCRNSNLMLLNLASNRLYGNIPTGILNCETLALLLLVGNSLTGGFPSQLCKLVNLTAVELNQNRFSGPISPEVGRCQKLQRLHIANNYFTLELPIEIGNLSQLVTFNVSSNSFIGPIPHEIVRCKKLQRLDLSRNSFAGPLPDELGTLSQLELLKLSDNKLTGHIPPTLGNLRRLTALQMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLIGSIPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFGNMEISSFVGNNGLCGAPLLGCNTNPSSLSDPPMQNVNASRTKMITIVATVVGGVALVLIVIILYFMRRPPEPISSLRDSEIPTPDSDIYFPPKDGFTFHDLLEATNNFHDSYVIGRGACGTVYKAVMPSSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMAMGSLGEQLHGYACTLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKNYIRSHNNKLSSGVLDNRLNLQDQTTVNHMLTVLKIALLCTNMNPTDRPSMRQVVLMLIESNEREGNLATSPSQFENLASKEDDEQEST 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0586 1028 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 198 302 - -
Prci4g0586 1028 FunFam Piriformospora indica-insensitive protein 2 7 103 - -
Prci4g0586 1028 SUPERFAMILY Protein kinase-like (PK-like) 698 997 IPR011009 -
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 510 637 IPR032675 -
Prci4g0586 1028 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 326 640 - -
Prci4g0586 1028 MobiDBLite consensus disorder prediction 1004 1028 - -
Prci4g0586 1028 SUPERFAMILY L domain-like 299 636 - -
Prci4g0586 1028 FunFam Leucine-rich repeat receptor protein kinase MSP1 688 801 - -
Prci4g0586 1028 CDD TM_EGFR-like 657 683 - -
Prci4g0586 1028 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 104 197 - -
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 402 509 IPR032675 -
Prci4g0586 1028 Gene3D Phosphorylase Kinase; domain 1 695 801 - -
Prci4g0586 1028 ProSiteProfiles Protein kinase domain profile. 723 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0586 1028 SMART serkin_6 723 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0586 1028 Gene3D Transferase(Phosphotransferase) domain 1 802 1021 - -
Prci4g0586 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 235 397 IPR032675 -
Prci4g0586 1028 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 802 1014 - -
Prci4g0586 1028 SMART LRR_typ_2 206 230 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 158 181 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 567 590 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 110 134 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 398 422 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 14 38 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 494 518 IPR003591 -
Prci4g0586 1028 SMART LRR_typ_2 278 301 IPR003591 -
Prci4g0586 1028 SUPERFAMILY L domain-like 9 338 - -
Prci4g0586 1028 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 306 998 - -
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 158 234 IPR032675 -
Prci4g0586 1028 Pfam Protein kinase domain 724 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 1 97 IPR032675 -
Prci4g0586 1028 Gene3D Ribonuclease Inhibitor 98 157 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0586 Prci-Chr4 4038638 4044290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0586 3 997 Receptor kinase-like Gene Family AT1G73080 37.825 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci4g0586 Pkinase 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0586 - - qsa:O6P43_003073 1511.12