Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0585 ATGATGTCTGGGAATTTCAAAAAAAGGGGAGCGTTGGCAACTCTACTGCTATTCACTTTACTTCTTTGTATCACAGAAGGATTGAACACAGAAGGCCAGCACCTGCTCGAGCTGAAGAGCAGTCTTCATGACGAATCTAATCATTTGGCGAATTGGAAGTCTACTGATGAAACACCTTGTGGGTGGACGGGCGTAAATTGCACTTCTGACTATAATCCAGTGGTCTGGTCCCTTGATTTGAGCTCAATGAATCTTTCCGGAACACTAAATCCTAGCATTGGAGGTCTGACGCATCTAACTTATCTCAATCTTGCCGACAATGGGCTGATGGGAAATATACCCAATGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTTCTTGAACAATAATCGATTCAGGGGACAAGTTCCTGCTGAATTGGGGAAGCTTTCCCTTCTGAGGCGTTTGAATATTTGCAACAACATAGTCTCAGGTTCTCTGCCAGAAGAATTGGGAAACCTGTCTTCGCTGGTTGAGCTTGTGGCCTACACAAATAATCTGTCCGGTCCCCTGCCTCGTTCTATTGGAAATCTCAAGAGTCTCACTACTTTGAGAGCCGGGGGGAATAGATTGTCAGGTAGCTTGCCAAGTGAGATCGGTGGATGTAGGAGCATGGAATTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTGCCGACAGAGATTGGGATGCTTCAGAACTTAAGAGAACTGGTTTTGTGGAATAACCAGTTATCAGGGCTTATTCCTAAAGAGCTTGGGAATTGTACCAGCCTTGAAACCCTTGCTTTCTATGGAAATGCTCTTGTTGGACCTATACCTGAGGAGATTGGGAATCTCAAGTCTCTGGGGAGGTTGTACCTTTACAGAAATAAATTGAATGGCACCATTCCAAGGACGATTGGGAATCTTTCTCTGGCATTAGAAGTTGATTTCTCAGAAAACTCTTTGGTGGGAGATATTCCTCCTGAGATCAGCAAAATAAGTGGTCTCCACTTGCTCTTTCTCTTTGAAAACGAGCTATCCGGTGTTATACCCAACGAGTTTAGTAGCTTAAGGAACCTGACAAGGCTGGACCTGTCCATTAATAATCTCACCGGTCCAGTTCCGTGGGGGTTCCAGTACTTGACTCGAATGTCTCAGTTGCAACTTAATGACAACTCTCTAACTGGAAATATTCCCCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTAACAATCACTTGACAGGAACGATACCTCCCCATCTATGTCGAAATTCGAACTTGATGTTGTTGAATCTGGCTTCTAATCGACTTTATGGAAATATACCAACTGGCATCCTGAATTGTGAAACGTTGGCACTGCTACTGCTGGTTGGAAATAGTCTTACTGGTGGCTTCCCTTCACAGCTGTGCAAACTAGTGAACCTTACTGCCGTTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCTGAGGTCGGGAGGTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTATAGAAATAGGAAACCTTTCTCAATTGGTGACCTTCAATGTTTCATCCAATTCTTTCATTGGACCTATCCCGCATGAAATTGTTAGATGCAAGAAGCTTCAGCGACTTGATCTCAGCCGCAACAGCTTTGCTGGTCCCCTGCCAGATGAGCTTGGAACACTCTCTCAGTTGGAGCTTCTCAAGCTTTCAGATAATAAGCTTACAGGGCATATCCCTCCAACATTAGGTAATCTGCGTCGTCTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGAGAAATACCTCCTGATTTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAATAATCTCATTGGAAGTATACCTGATAAGCTGGGCAATCTCTATATGCTTGAGTTTCTCCTTCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGTTTGATGGGGTGTAATTTCTCATACAACAATCTCTCTGGACCTATACCTTCCATTCCACTATTTGGAAATATGGAAATTAGCAGCTTTGTTGGTAACAATGGCCTCTGCGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTCTCTTTCTGATCCTCCTATGCAAAATGTTAATGCTTCTCGCACCAAGATGATCACTATTGTTGCAACAGTTGTTGGTGGCGTTGCTCTCGTTCTAATAGTAATCATTTTATATTTTATGAGACGTCCTCCTGAGCCTATTTCTTCGCTGAGGGATTCTGAGATTCCGACCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACCAACAACTTTCATGACAGTTATGTCATTGGAAGAGGGGCTTGCGGAACAGTTTATAAGGCAGTGATGCCATCATCCGGAAAGACTATTGCTGTTAAGAAGTTAGCATCCAACAGGGAAGGGAACAACATCGAGAATAGCTTCCGGGCTGAAATATTAACTCTTGGAAAGATAAGGCACCGAAATATAGTGAAGTTGTATGGGTTTTGCTATCACCAAGGTAGCAATCTCCTACTATACGAGTACATGGCAATGGGTAGCCTAGGGGAGCAACTTCATGGATATGCATGTACTTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGCGATATAAAATCGAATAACATTCTACTTGATGAAAACTTTGAGGCCCACGTGGGTGACTTTGGTTTGGCGAAAGTTATTGACATGCCTCAATCAAAATCAATGTCAGCAGTTGCTGGATCATATGGTTATATTGCTCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGATATCTATAGCTATGGAGTTGTGCTGCTGGAGCTGCTTACAGGAAGAACTCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAACTACATTCGGAGCCATAACAACAAGCTGTCGTCTGGTGTGCTCGACAATCGTCTCAATCTCCAAGATCAAACCACCGTGAACCACATGCTCACCGTTCTAAAAATTGCTTTGCTCTGCACAAACATGAACCCTACTGATCGGCCATCGATGCGCCAGGTCGTGTTGATGCTTATAGAATCCAACGAGCGAGAAGGAAACCTGGCCACTTCTCCATCTCAGTTTGAGAATCTTGCTTCCAAAGAAGACGACGAGCAAGAGAGTACGTGA 3333 0.4389 MMSGNFKKRGALATLLLFTLLLCITEGLNTEGQHLLELKSSLHDESNHLANWKSTDETPCGWTGVNCTSDYNPVVWSLDLSSMNLSGTLNPSIGGLTHLTYLNLADNGLMGNIPNEIGNCSSLEFLFLNNNRFRGQVPAELGKLSLLRRLNICNNIVSGSLPEELGNLSSLVELVAYTNNLSGPLPRSIGNLKSLTTLRAGGNRLSGSLPSEIGGCRSMEFLGLAQNQIGGELPTEIGMLQNLRELVLWNNQLSGLIPKELGNCTSLETLAFYGNALVGPIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSLALEVDFSENSLVGDIPPEISKISGLHLLFLFENELSGVIPNEFSSLRNLTRLDLSINNLTGPVPWGFQYLTRMSQLQLNDNSLTGNIPQSLGLYSPLWVVDFSNNHLTGTIPPHLCRNSNLMLLNLASNRLYGNIPTGILNCETLALLLLVGNSLTGGFPSQLCKLVNLTAVELNQNRFSGPISPEVGRCQKLQRLHIANNYFTLELPIEIGNLSQLVTFNVSSNSFIGPIPHEIVRCKKLQRLDLSRNSFAGPLPDELGTLSQLELLKLSDNKLTGHIPPTLGNLRRLTALQMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLIGSIPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFGNMEISSFVGNNGLCGAPLLGCNTNPSSLSDPPMQNVNASRTKMITIVATVVGGVALVLIVIILYFMRRPPEPISSLRDSEIPTPDSDIYFPPKDGFTFHDLLEATNNFHDSYVIGRGACGTVYKAVMPSSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMAMGSLGEQLHGYACTLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKNYIRSHNNKLSSGVLDNRLNLQDQTTVNHMLTVLKIALLCTNMNPTDRPSMRQVVLMLIESNEREGNLATSPSQFENLASKEDDEQEST 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0585 1110 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 27 185 - -
Prci4g0585 1110 Pfam Protein kinase domain 806 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0585 1110 SUPERFAMILY Protein kinase-like (PK-like) 780 1079 IPR011009 -
Prci4g0585 1110 Gene3D Ribonuclease Inhibitor 409 722 IPR032675 -
Prci4g0585 1110 SUPERFAMILY L domain-like 30 330 - -
Prci4g0585 1110 SMART serkin_6 805 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0585 1110 FunFam Leucine-rich repeat receptor protein kinase MSP1 770 883 - -
Prci4g0585 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Prci4g0585 1110 Gene3D Ribonuclease Inhibitor 25 91 IPR032675 -
Prci4g0585 1110 Gene3D Ribonuclease Inhibitor 92 408 IPR032675 -
Prci4g0585 1110 MobiDBLite consensus disorder prediction 1086 1110 - -
Prci4g0585 1110 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Prci4g0585 1110 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 884 1096 - -
Prci4g0585 1110 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 280 384 - -
Prci4g0585 1110 SUPERFAMILY L domain-like 381 718 - -
Prci4g0585 1110 Gene3D Phosphorylase Kinase; domain 1 777 883 - -
Prci4g0585 1110 ProSiteProfiles Protein kinase domain profile. 805 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0585 1110 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 186 279 - -
Prci4g0585 1110 Gene3D Transferase(Phosphotransferase) domain 1 884 1103 - -
Prci4g0585 1110 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 459 1079 - -
Prci4g0585 1110 SMART LRR_typ_2 649 672 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 576 600 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 288 312 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 360 383 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 240 263 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 480 504 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 192 216 IPR003591 -
Prci4g0585 1110 SMART LRR_typ_2 96 120 IPR003591 -
Prci4g0585 1110 CDD TM_EGFR-like 739 765 - -
Prci4g0585 1110 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 408 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0585 Prci-Chr4 4038638 4044291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0585 50 1079 Receptor kinase-like Gene Family AT1G73080 37.732 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci4g0585 Pkinase 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0585 - - qsa:O6P43_003073 1611.66