Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0560 ATGAATAATGAGGCTCCAGGCACTCAAGGCCAGTGGCTTAAAGGTGTAGTAATTGCCGGTTCAAATGATAGAATCGTTTCAGACGACAATGAAGACAATGTATGTTTGCAGACAGGTGAAGAGTTTTCAACTGAGTTCTATCGTGATCGGTTTGGTTTAAGGAGACTCCCTGTCACAACTGATGCGGACAATCACCAGCCAAATAGATTGGGTTTAGATTATAGTCAAAATTATCAGGTGGTTTATGATGATCTTGCACGCGTTGTTGGCCTAAGGAGAAGGGATTCTGATAGTAATTCAGATTTGTCAGATTTCGTTACAACGCCTTCATACATTGCTGAACCTGAAAGCAAGGCATATCCTAACAATTTGAGCAAGTTCCAGTGGGAACATGGTGGTATTGGACAACGATCTGGTAACTTTGCTGAAGAAATTTATTTGGATCAAATCTCTTCAGGACCAATGGCATCACCCATTTATGCTGTTGAATCCCTTCAGTCATGCCATCCTCATCCTTCAACATTTTCAGATGCTTCGTGTTTTAAGAAGATAAAATTTCTTTGTAGCTTTGGAGGGAGAATATTACCAAGGCCAAATGACGGTAAGCTCAGATATGTCGGAGGAGAGACACGAATTATATCCTTAAGGAAAAACATTACTTGGAAGCAACTTATGGAGAAGACTTGTGCAATATGGAACGTCACTCACATTACCAAATACCAGCTTCCTGGAGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTAATCATATGATAGAGGAGTATGAGGAACTTGAAAGAATTGGAGGCTCTCAACGATTGCGGATATTTCTCATATCGTCAAGTGAATCTGAGAACCCAAACTCTATTGAAGCAAAAGTCAGTCTGCCAGGTGATGTTGACTACCAGTACGTTGTTGCTGTAAATGGCGTGCTGGAACCAAGTCCTCGGAAGAGCTCTAGTGGGCAAGGTTTGGTAAACCAGACGAGCCAGTTTGGAAATACCTCTGATTTCAATAGTCCGATATTGTTTAAGGAATCAGATGCATCTGCATTTGCTTGGGATGTCAAGGATTGCAGTCTAATGTCCCCACGTTTAGGAGGATTGCTGAATAAAGCTAGTTCTCAGCTTTTAACAGCACTTCAAGTGCCAGGAAAATCATTCAATCAATCACCACCTAGTCCTATATCTCGTATTCGTGCTCAGCCTAAAGATCATCAGATTTCCAACATAGAGCTGATTATGGATCAACCATGCAATGTTGGTAATGAAGGCCTTGTTCCTTTTGTGAAGGAAAGGACTCAATGTGAAAATTCCTTGTATAAAGATGATGCCCATTATGTTGATCCAGCTGCATACTACAAAAATCTAGCCCAAGGGTCTCGCTTTCTGAATCATCATCATAATAATCAACATATAGTGGAGGTTGATCAGCCCGAGAATCTCATCGATGATGTTCAATGTCACGTGAGAAGGAACAGTGAAAACTTTGTTTCTTCTGCAACGTGTGGTCAAGGTGATATGATGTTTGAGAGACCCCCACGACCAAATGAGGGTTCATTCCGTCTTGTTAAGAATCTCTCTCATCATGAAGCATCATCATTAGTAATTTCAGTATCTAATGATAGAGATAGAGAGAGGCCTCCTTGTAGATTGTTGCATGCACTTTCTGACCCATTATTGCAGAAGCGCGATGAGAGGTTTGAAGATCAATTGCAGCCCTCCCTTACAGTAAAGGGAAACAAGTCACCTTTAATACAAGTTTCAAGTTCTTCCCGGGAAAGGCCATTACAGGAGGGAGAGGTAATTGATGAAAAAAACCTGGTAGCTGAGCATCAATTTTTGCCCAGTTTTGGAAAGATTGGAAGTTTCAAGGGGATTTCGAGTCCTAATCAAGGGAGTTTGCAACTTGCAGATAATGACAATACCTGTTCTGGTGAAATAGGAAGATTTGGAGGCAATATTGAAGTTACATCACATGAAAATGTCTTGCATATCAAAGATTTAGAGGGCATTGATTACAAACAAGTTGGTTGCCAATCTTCAGTAGAGTTACAAAGAAGTGAATGCAGATTACTTGCTTCTTCATTACAGTCTGAATCTACACGAAACCTGAAGGAGCAACCTCATGGTCTACTACAAGACTTGGCTGCTTCTGAGCTTATGATAAGAAGCCAAAATTCGACAATGTATCAGCAAGTTACTGTGTCAACAACAGATAATAGCAAGTCATCTCACCTTGGTTCCTCTGATTTACAGTTTATTGACTCCCTAACGGACATAGAGTCTACGCTACTAGTCACAAATACATATAAAGGATCAGCTTCCAGAGGGAAGATTTTTCTCCCTGACAAGAATCCTGCCAACTGTCCTCACCAGAAGAATGACAAGATTGTTTGTGACCAAGATTATTTTGTTAGGTATAACATTGAGTTAAGTGACCAGTCACGAAGCTCTGTAACTAGTCAAGAAATCAAGCAGCTAAATGCAGCAGCTATTGTTGAAGGGCCAGCTGGTAGCATCTCTTCAGGTGTAGATGTAGATGAAGAGGATGAATCTGAAGCTGTGTTTCGTAAAAAGGAAGAGATAGAAAGTGGCTGTTCAGTATCTCAAAATGAGTTTGCAAAAGACGATAATAGAAACTTCAATAAGCCAATTGGACCAGCAACTGTTGAAATAGAGGCCGAACTCTATGGTTTGCAGATTATCAAGAACGTTGATATTGAAGAATTGCAAGAGCTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATCAAGAGGATAAAAAGTAGTTGTTTTTCTGGCAGATTATCAGAACAAGAGCGGTTGAAAAGAGATTTCTGGCGGGAGGCAAAAATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCTGGTGGGACGTTGGCAACTCTAACAGAATTTATGGTACATGGATCACTGAGGAATGTCCTCTTGAAGAAGGAAAAAGTTCTTGATCGCCGAAAGCGGCTTATGATTGCAATGGATGCAGCCTTTGGCATGGAATATCTGCATTTTAAGAATATTGTCCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGGGATCCTGAACGGCCTGTGTGCAAGGTTGCTGATTTTGGGCTATCAAGAATTAAGCACAACACACTTGTTTCCGGTGGTGTCAGAGGAACCCTTCCATGGATGGCACCAGAATTATTAGATGGAAACAGTAGCGGGGTCTCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAGATCTTGACTGGGGAAGAGCCATATGCTAGCATGCACTGTGGTGCTATCATAGGTGGAATAGTCAATAATACACTCAGGCCTCCAATCCCAAAACGTTGTGATTCTGAATGGAAAAGGCTAATGGAAGAATGCTGGAGCCCTGATCCTGCAGCCAGGCCATCTTTCACAGACATAACACATAGATTTCGCCTTATGCAAGCGGCTCTGCCGAAGAAGAAACCCTGTCCTGCAACTTGA 3576 0.4141 MNNEAPGTQGQWLKGVVIAGSNDRIVSDDNEDNVCLQTGEEFSTEFYRDRFGLRRLPVTTDADNHQPNRLGLDYSQNYQVVYDDLARVVGLRRRDSDSNSDLSDFVTTPSYIAEPESKAYPNNLSKFQWEHGGIGQRSGNFAEEIYLDQISSGPMASPIYAVESLQSCHPHPSTFSDASCFKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISLRKNITWKQLMEKTCAIWNVTHITKYQLPGEDLDALISVCSDEDLNHMIEEYEELERIGGSQRLRIFLISSSESENPNSIEAKVSLPGDVDYQYVVAVNGVLEPSPRKSSSGQGLVNQTSQFGNTSDFNSPILFKESDASAFAWDVKDCSLMSPRLGGLLNKASSQLLTALQVPGKSFNQSPPSPISRIRAQPKDHQISNIELIMDQPCNVGNEGLVPFVKERTQCENSLYKDDAHYVDPAAYYKNLAQGSRFLNHHHNNQHIVEVDQPENLIDDVQCHVRRNSENFVSSATCGQGDMMFERPPRPNEGSFRLVKNLSHHEASSLVISVSNDRDRERPPCRLLHALSDPLLQKRDERFEDQLQPSLTVKGNKSPLIQVSSSSRERPLQEGEVIDEKNLVAEHQFLPSFGKIGSFKGISSPNQGSLQLADNDNTCSGEIGRFGGNIEVTSHENVLHIKDLEGIDYKQVGCQSSVELQRSECRLLASSLQSESTRNLKEQPHGLLQDLAASELMIRSQNSTMYQQVTVSTTDNSKSSHLGSSDLQFIDSLTDIESTLLVTNTYKGSASRGKIFLPDKNPANCPHQKNDKIVCDQDYFVRYNIELSDQSRSSVTSQEIKQLNAAAIVEGPAGSISSGVDVDEEDESEAVFRKKEEIESGCSVSQNEFAKDDNRNFNKPIGPATVEIEAELYGLQIIKNVDIEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLKRDFWREAKILSTLHHPNVVAFYGVVPDGPGGTLATLTEFMVHGSLRNVLLKKEKVLDRRKRLMIAMDAAFGMEYLHFKNIVHFDLKCDNLLVNLGDPERPVCKVADFGLSRIKHNTLVSGGVRGTLPWMAPELLDGNSSGVSEKVDIFSFGIAMWEILTGEEPYASMHCGAIIGGIVNNTLRPPIPKRCDSEWKRLMEECWSPDPAARPSFTDITHRFRLMQAALPKKKPCPAT 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0560 1191 Gene3D Phosphorylase Kinase; domain 1 905 999 - -
Prci4g0560 1191 SUPERFAMILY Protein kinase-like (PK-like) 907 1173 IPR011009 -
Prci4g0560 1191 PRINTS Tyrosine kinase catalytic domain signature 994 1007 IPR001245 GO:0004672|GO:0006468
Prci4g0560 1191 PRINTS Tyrosine kinase catalytic domain signature 1102 1124 IPR001245 GO:0004672|GO:0006468
Prci4g0560 1191 PRINTS Tyrosine kinase catalytic domain signature 1146 1168 IPR001245 GO:0004672|GO:0006468
Prci4g0560 1191 PRINTS Tyrosine kinase catalytic domain signature 1031 1049 IPR001245 GO:0004672|GO:0006468
Prci4g0560 1191 CDD PB1_UP2 187 283 - -
Prci4g0560 1191 ProSitePatterns Protein kinases ATP-binding region signature. 918 939 IPR017441 GO:0005524
Prci4g0560 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1037 1049 IPR008271 GO:0004672|GO:0006468
Prci4g0560 1191 CDD STKc_MAP3K-like 918 1175 - -
Prci4g0560 1191 PANTHER SERINE-THREONINE PROTEIN KINASE 250 1176 - -
Prci4g0560 1191 SMART serkin_6 912 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0560 1191 SMART PB1_new 198 285 IPR000270 GO:0005515
Prci4g0560 1191 SUPERFAMILY CAD & PB1 domains 199 289 - -
Prci4g0560 1191 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 905 999 - -
Prci4g0560 1191 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1000 1189 - -
Prci4g0560 1191 ProSiteProfiles Protein kinase domain profile. 912 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0560 1191 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 203 285 - -
Prci4g0560 1191 Pfam Protein tyrosine and serine/threonine kinase 914 1174 IPR001245 GO:0004672|GO:0006468
Prci4g0560 1191 Gene3D - 202 285 - -
Prci4g0560 1191 Pfam PB1 domain 199 282 IPR000270 GO:0005515
Prci4g0560 1191 Gene3D Transferase(Phosphotransferase) domain 1 1000 1187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0560 Prci-Chr4 3907863 3915665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0560 35 329 MAP Kinase Kinase Kinase AT1G16270 41.356 3.01e-42 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci4g0560 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0560 - - pcin:129308082 2382.83