Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0559 ATGAATAATGAGGCTCCAGGCACTCAAGGCCAGTGGCTTAAAGGTGTAGTAATTGCCGGTTCAAATGATAGAATCGTTTCAGACGACAATGAAGACAATGTATGTTTGCAGACAGGTGAAGAGTTTTCAACTGAGTTCTATCGTGATCGGTTTGGTTTAAGGAGACTCCCTGTCACAACTGATGCGGACAATCACCAGCCAAATAGATTGGGTTTAGATTATAGTCAAAATTATCAGGTGGTTTATGATGATCTTGCACGCGTTGTTGGCCTAAGGAGAAGGGATTCTGATAGTAATTCAGATTTGTCAGATTTCGTTACAACGCCTTCATACATTGCTGAACCTGAAAGCAAGGCATATCCTAACAATTTGAGCAAGTTCCAGTGGGAACATGGTGGTATTGGACAACGATCTGGTAACTTTGCTGAAGAAATTTATTTGGATCAAATCTCTTCAGGACCAATGGCATCACCCATTTATGCTGTTGAATCCCTTCAGTCATGCCATCCTCATCCTTCAACATTTTCAGATGCTTCGTGTTTTAAGAAGATAAAATTTCTTTGTAGCTTTGGAGGGAGAATATTACCAAGGCCAAATGACGGTAAGCTCAGATATGTCGGAGGAGAGACACGAATTATATCCTTAAGGAAAAACATTACTTGGAAGCAACTTATGGAGAAGACTTGTGCAATATGGAACGTCACTCACATTACCAAATACCAGCTTCCTGGAGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTAATCATATGATAGAGGAGTATGAGGAACTTGAAAGAATTGGAGGCTCTCAACGATTGCGGATATTTCTCATATCGTCAAGTGAATCTGAGAACCCAAACTCTATTGAAGCAAAAGTCAGTCTGCCAGGTGATGTTGACTACCAGTACGTTGTTGCTGTAAATGGCGTGCTGGAACCAAGTCCTCGGAAGAGCTCTAGTGGGCAAGGTTTGGTAAACCAGACGAGCCAGTTTGGAAATACCTCTGATTTCAATAGTCCGATATTGTTTAAGGAATCAGATGCATCTGCATTTGCTTGGGATGTCAAGGATTGCAGTCTAATGTCCCCACGTTTAGGAGGATTGCTGAATAAAGCTAGTTCTCAGCTTTTAACAGCACTTCAAGTGCCAGGAAAATCATTCAATCAATCACCACCTAGTCCTATATCTCGTATTCGTGCTCAGCCTAAAGATCATCAGATTTCCAACATAGAGCTGATTATGGATCAACCATGCAATGTTGGTAATGAAGGCCTTGTTCCTTTTGTGAAGGAAAGGACTCAATGTGAAAATTCCTTGTATAAAGATGATGCCCATTATGTTGATCCAGCTGCATACTACAAAAATCTAGCCCAAGGGTCTCGCTTTCTGAATCATCATCATAATAATCAACATATAGTGGAGGTTGATCAGCCCGAGAATCTCATCGATGATGTTCAATGTCACGTGAGAAGGAACAGTGAAAACTTTGTTTCTTCTGCAACGTGTGGTCAAGGTGATATGATGTTTGAGAGACCCCCACGACCAAATGAGGGTTCATTCCGTCTTGTTAAGAATCTCTCTCATCATGAAGCATCATCATTAGTAATTTCAGTATCTAATGATAGAGATAGAGAGAGGCCTCCTTGTAGATTGTTGCATGCACTTTCTGACCCATTATTGCAGAAGCGCGATGAGAGGTTTGAAGATCAATTGCAGCCCTCCCTTACAGTAAAGGGAAACAAGTCACCTTTAATACAAGTTTCAAGTTCTTCCCGGGAAAGGCCATTACAGGAGGGAGAGGTAATTGATGAAAAAAACCTGGTAGCTGAGCATCAATTTTTGCCCAGTTTTGGAAAGATTGGAAGTTTCAAGGGGATTTCGAGTCCTAATCAAGGGAGTTTGCAACTTGCAGATAATGACAATACCTGTTCTGGTGAAATAGGAAGATTTGGAGGCAATATTGAAGTTACATCACATGAAAATGTCTTGCATATCAAAGATTTAGAGGGCATTGATTACAAACAAGTTGGTTGCCAATCTTCAGTAGAGTTACAAAGAAGTGAATGCAGATTACTTGCTTCTTCATTACAGTCTGAATCTACACGAAACCTGAAGGAGCAACCTCATGGTCTACTACAAGACTTGGCTGCTTCTGAGCTTATGATAAGAAGCCAAAATTCGACAATGTATCAGCAAGTTACTGTGTCAACAACAGATAATAGCAAGTCATCTCACCTTGGTTCCTCTGATTTACAGTTTATTGACTCCCTAACGGACATAGAGTCTACGCTACTAGTCACAAATACATATAAAGGATCAGCTTCCAGAGGGAAGATTTTTCTCCCTGACAAGAATCCTGCCAACTGTCCTCACCAGAAGAATGACAAGATTGTTTGTGACCAAGATTATTTTGTTAGGTATAACATTGAGTTAAGTGACCAGTCACGAAGCTCTGTAACTAGTCAAGAAATCAAGCAGCTAAATGCAGCAGCTATTGTTGAAGGGCCAGCTGGTAGCATCTCTTCAGGTGTAGATGTAGATGAAGAGGATGAATCTGAAGCTGTGTTTCGTAAAAAGGAAGAGATAGAAAGTGGCTGTTCAGTATCTCAAAATGAGATTATCAAGAACGTTGATATTGAAGAATTGCAAGAGCTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATCAAGAGGATAAAAAGTAGTTGTTTTTCTGGCAGATTATCAGAACAAGAGCGGTTGAAAAGAGATTTCTGGCGGGAGGCAAAAATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCTGGTGGGACGTTGGCAACTCTAACAGAATTTATGGTACATGGATCACTGAGGAATGTCCTCTTGAAGAAGGAAAAAGTTCTTGATCGCCGAAAGCGGCTTATGATTGCAATGGATGCAGCCTTTGGCATGGAATATCTGCATTTTAAGAATATTGTCCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGGGATCCTGAACGGCCTGTGTGCAAGGTTGCTGATTTTGGGCTATCAAGAATTAAGCACAACACACTTGTTTCCGGTGGTGTCAGAGGAACCCTTCCATGGATGGCACCAGAATTATTAGATGGAAACAGTAGCGGGGTCTCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAGATCTTGACTGGGGAAGAGCCATATGCTAGCATGCACTGTGGTGCTATCATAGGTGGAATAGTCAATAATACACTCAGGCCTCCAATCCCAAAACGTTGTGATTCTGAATGGAAAAGGCTAATGGAAGAATGCTGGAGCCCTGATCCTGCAGCCAGGCCATCTTTCACAGACATAACACATAGATTTCGCCTTATGCAAGCGGCTCTGCCGAAGAAGAAACCCTGTCCTGCAACTTGA 3492 0.4147 MNNEAPGTQGQWLKGVVIAGSNDRIVSDDNEDNVCLQTGEEFSTEFYRDRFGLRRLPVTTDADNHQPNRLGLDYSQNYQVVYDDLARVVGLRRRDSDSNSDLSDFVTTPSYIAEPESKAYPNNLSKFQWEHGGIGQRSGNFAEEIYLDQISSGPMASPIYAVESLQSCHPHPSTFSDASCFKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISLRKNITWKQLMEKTCAIWNVTHITKYQLPGEDLDALISVCSDEDLNHMIEEYEELERIGGSQRLRIFLISSSESENPNSIEAKVSLPGDVDYQYVVAVNGVLEPSPRKSSSGQGLVNQTSQFGNTSDFNSPILFKESDASAFAWDVKDCSLMSPRLGGLLNKASSQLLTALQVPGKSFNQSPPSPISRIRAQPKDHQISNIELIMDQPCNVGNEGLVPFVKERTQCENSLYKDDAHYVDPAAYYKNLAQGSRFLNHHHNNQHIVEVDQPENLIDDVQCHVRRNSENFVSSATCGQGDMMFERPPRPNEGSFRLVKNLSHHEASSLVISVSNDRDRERPPCRLLHALSDPLLQKRDERFEDQLQPSLTVKGNKSPLIQVSSSSRERPLQEGEVIDEKNLVAEHQFLPSFGKIGSFKGISSPNQGSLQLADNDNTCSGEIGRFGGNIEVTSHENVLHIKDLEGIDYKQVGCQSSVELQRSECRLLASSLQSESTRNLKEQPHGLLQDLAASELMIRSQNSTMYQQVTVSTTDNSKSSHLGSSDLQFIDSLTDIESTLLVTNTYKGSASRGKIFLPDKNPANCPHQKNDKIVCDQDYFVRYNIELSDQSRSSVTSQEIKQLNAAAIVEGPAGSISSGVDVDEEDESEAVFRKKEEIESGCSVSQNEIIKNVDIEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLKRDFWREAKILSTLHHPNVVAFYGVVPDGPGGTLATLTEFMVHGSLRNVLLKKEKVLDRRKRLMIAMDAAFGMEYLHFKNIVHFDLKCDNLLVNLGDPERPVCKVADFGLSRIKHNTLVSGGVRGTLPWMAPELLDGNSSGVSEKVDIFSFGIAMWEILTGEEPYASMHCGAIIGGIVNNTLRPPIPKRCDSEWKRLMEECWSPDPAARPSFTDITHRFRLMQAALPKKKPCPAT 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0559 1163 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 203 285 - -
Prci4g0559 1163 Gene3D - 202 285 - -
Prci4g0559 1163 SUPERFAMILY Protein kinase-like (PK-like) 883 1145 IPR011009 -
Prci4g0559 1163 ProSitePatterns Protein kinases ATP-binding region signature. 890 911 IPR017441 GO:0005524
Prci4g0559 1163 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 972 1161 - -
Prci4g0559 1163 CDD PB1_UP2 187 283 - -
Prci4g0559 1163 Pfam PB1 domain 199 282 IPR000270 GO:0005515
Prci4g0559 1163 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 877 971 - -
Prci4g0559 1163 SUPERFAMILY CAD & PB1 domains 199 289 - -
Prci4g0559 1163 Gene3D Transferase(Phosphotransferase) domain 1 972 1159 - -
Prci4g0559 1163 ProSiteProfiles Protein kinase domain profile. 884 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0559 1163 SMART PB1_new 198 285 IPR000270 GO:0005515
Prci4g0559 1163 SMART serkin_6 884 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0559 1163 Gene3D Phosphorylase Kinase; domain 1 878 971 - -
Prci4g0559 1163 PANTHER SERINE-THREONINE PROTEIN KINASE 250 1148 - -
Prci4g0559 1163 Pfam Protein tyrosine and serine/threonine kinase 886 1146 IPR001245 GO:0004672|GO:0006468
Prci4g0559 1163 CDD STKc_MAP3K-like 890 1147 - -
Prci4g0559 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Prci4g0559 1163 PRINTS Tyrosine kinase catalytic domain signature 1074 1096 IPR001245 GO:0004672|GO:0006468
Prci4g0559 1163 PRINTS Tyrosine kinase catalytic domain signature 966 979 IPR001245 GO:0004672|GO:0006468
Prci4g0559 1163 PRINTS Tyrosine kinase catalytic domain signature 1003 1021 IPR001245 GO:0004672|GO:0006468
Prci4g0559 1163 PRINTS Tyrosine kinase catalytic domain signature 1118 1140 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0559 Prci-Chr4 3907863 3915665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0559 35 329 MAP Kinase Kinase Kinase AT1G16270 41.356 3.19e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Prci4g0559 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0559 - - pcin:129308082 2311.18