Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0542 ATGCGTTTCGCACTCTTCCGAACTGAAACCTGTAAGTTTCTCGTCACCGTCGGCTGTCTTCCATCTCAAATTCAAATGGACATGGATATGGACATTCCTGTTCCAGAAGAACTGGAGTTGCTGGAATCCAATGCTCGTCTTCTCGAAGACTACCCAGACCTGGAGCCACCGGAACCCTACCCGTACGAAGACCAAGAAGCGCCACCAGCGGTTCAACCACCATCAACCCCACATCTTCAATTTGACTCTGAAATCCAAGTCATCAGCCACAAGCGATCAAGGTCGGTTAGTCCCAACGGATCACTTTCAGAAGCTGCGGAGCTGTCAGAGGAGAAAAGGTGCAGGACTGACGAGTCGGCACGAGCGACTAATGAGGATTGGCTTCGCTACTCGCCACCCAAGGGTAGCGAGTCTGTAGTGGGAGAACAAGCGAGCTTTGTGGAGGAGAAAATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTATACCGGTCACTGCACCCAACGGCGACAGGGTTTATGCGAAGTTAGATAGGTTAGAAGGGGACCAGAGATCGAAGAAACTGAATGTGAGAGCAAATTCTGACGGTCTTATATTAGAACCCATTAATATTCTATTTGAAAAATTGGATCAAGAGGCTTTAACTAAGACATTGAAAGCTAGTTCTGAATGCCAAAATGTTCCGGATGTTCCTGAAAAACCAATCATCCACGAGCAACTTTGGGTTGATAAATACACTCCAAATTCATTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTGTGGTTGAAGCAATGGGATTCTAGTGTATTTGGATCTGATATTTGCAGCACGTCAGATGAAGTTCTGTCTGCCTTGAAACGACATTCTACTATTGTCCAAAATCAGAAACCCTTAGATTCAAAATTTCAAAGAATGAGTGGAGGCCCTAAATGGAGTAACAAGAGATATAGACATTCTAGAAGCATGGATGAAAGTGGTAATTCAAATAGCTTTCAGGGTATATTGAATAGGAAAGCAAAGCATACTGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCTCCGGGTCTTGGAAAAACTACACTTGCACATGTAGCTGCTAGTCATTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTAGTACATCAACAATTGAATCTAAGATCCTTGATGTGGTTCAGATGAACTCTGTCATGTCTGATTCAAAACCGAAGTGCCTGGTGGTGGATGAAATTGATGGGGCTCTGTCCGATGGAAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGATGCGGGAAAGGAAAATTTGGCAAAAGAGCAATTGGGAAGGAGGTCCTCAAAGAAGGGACATAATAAAGCATCACTGTCAAGACCTGTAATTTGCATCTGCAATGACCTATATGCCCCTGCCCTGAGACCATTGCGTCAGGTAGCAAAGGTTCACATGTTTGTTCAACCAACAGTCAGTCGTGTGGTAAGCAGGCTCAAATACATATGTAACAAGGAGGGGATGAAAGCTAATGCCATTGCACTTACTGCCCTAGCAGAATATACAGAATGTGATATACGTTCATGCTTAAATACCCTCCAATTTCTCAGCAAGAAGAAAGAAACCCTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTAGACATTTGGAAGGAGGTTTTTCAAAGGAAAAAAATCAAGACAGAAAGAAAATATGACAATAGCATGCTTTTTGAAGTTAACTCCTTGTACTCCATTGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAATTCATGAAAACATTTTACATCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTAGGAGTTTCTGATCTACTGCATCAATATATCATGCGTACACAACAAGTTCCCCTTCTGGTTTACTTGCCACCCATAGCAATTACAATACATCGACTAGTAGCTCAAATTCAGAAGCCAAACATTGAATGGCCAAGGTCCTACCAAAGGTATCGAGCAATGATGGCAGAAAAGATGGACATTTTGAATACTTGGCACTACAAAATTCCACCATATATTGCAAGGCACTTATCAGCTAGTTCCTTTGTGGAAGACTTAATTTCTCCATTATTACATATCCTGTCCCCTCCAACTATAAAACCGGTGGCATCACAACTGCTGTCTGATAAAGAGAAAAATGATCTTGCTCAATTGGTTAGCACAATGGTATCTTACTCTGTAACATATAAGAACATGAAATCAGATATGCTGCCTAATAGCCTGAGACATGAAGTAGCAGATCACTTAACATTATCATTTGATCCGCCAATCTGTGACTTCATCAATTTTAAGGATTATACCTCAAATCATTATGTGCTTGCTCTAGCTGTCAAGCAGATTCTTGTGCATGAGGGAATCAAATTTAAAATAGTGAAATATAAACAGCAAAAGAACATAAAAAGGAAATGTGACAACTATCTGGTTCTTGGAAATTTCATCGAGTCCTTTCTATCCCTGGGATTTTTCGTAGGCCTTAGCAAGCTTGGATTGTTATCCTTCGTTTTAGCCACAATAGGTTGA 2658 0.4161 MRFALFRTETCKFLVTVGCLPSQIQMDMDMDIPVPEELELLESNARLLEDYPDLEPPEPYPYEDQEAPPAVQPPSTPHLQFDSEIQVISHKRSRSVSPNGSLSEAAELSEEKRCRTDESARATNEDWLRYSPPKGSESVVGEQASFVEEKMLSRYASEIDGECIPVTAPNGDRVYAKLDRLEGDQRSKKLNVRANSDGLILEPINILFEKLDQEALTKTLKASSECQNVPDVPEKPIIHEQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSDICSTSDEVLSALKRHSTIVQNQKPLDSKFQRMSGGPKWSNKRYRHSRSMDESGNSNSFQGILNRKAKHTGPPEQKILLLCGPPGLGKTTLAHVAASHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVMSDSKPKCLVVDEIDGALSDGKGAVEVLLKMVSVEKKSDAGKENLAKEQLGRRSSKKGHNKASLSRPVICICNDLYAPALRPLRQVAKVHMFVQPTVSRVVSRLKYICNKEGMKANAIALTALAEYTECDIRSCLNTLQFLSKKKETLNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKIKTERKYDNSMLFEVNSLYSIVSSRGDYDLILDGIHENILHLNYHDPVMQKTVKCLNSLGVSDLLHQYIMRTQQVPLLVYLPPIAITIHRLVAQIQKPNIEWPRSYQRYRAMMAEKMDILNTWHYKIPPYIARHLSASSFVEDLISPLLHILSPPTIKPVASQLLSDKEKNDLAQLVSTMVSYSVTYKNMKSDMLPNSLRHEVADHLTLSFDPPICDFINFKDYTSNHYVLALAVKQILVHEGIKFKIVKYKQQKNIKRKCDNYLVLGNFIESFLSLGFFVGLSKLGLLSFVLATIG 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0542 885 Gene3D - 504 575 - -
Prci4g0542 885 CDD AAA 352 442 - -
Prci4g0542 885 MobiDBLite consensus disorder prediction 61 75 - -
Prci4g0542 885 CDD HLD_clamp_RFC 504 562 - -
Prci4g0542 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 559 IPR027417 -
Prci4g0542 885 FunFam Chromosome transmission fidelity protein 18 504 571 - -
Prci4g0542 885 MobiDBLite consensus disorder prediction 106 120 - -
Prci4g0542 885 MobiDBLite consensus disorder prediction 90 104 - -
Prci4g0542 885 MobiDBLite consensus disorder prediction 309 338 - -
Prci4g0542 885 Pfam ATPase family associated with various cellular activities (AAA) 357 482 IPR003959 GO:0005524|GO:0016887
Prci4g0542 885 Gene3D - 240 503 IPR027417 -
Prci4g0542 885 MobiDBLite consensus disorder prediction 50 78 - -
Prci4g0542 885 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 28 847 - -
Prci4g0542 885 SMART AAA_5 353 507 IPR003593 GO:0016887
Prci4g0542 885 MobiDBLite consensus disorder prediction 90 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0542 Prci-Chr4 3795813 3807623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0542 354 551 Core DNA Replication Machinery Family AT5G22010 30.516 1.61e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0542 K11269 - gmx:100785041 1110.13