Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0488 ATGGACATGTTTTGTAGACTAAGAGTAGTAATCAGGGATGGATGGAATAATTTGTTGAAGCATCGGCGAAGCTTAAACTCCAAAATGTTTGATTGCTGTTTTATGATGCTCCATACAAAATTTATGATCTCACCTCTATCTATTTCAGAATGGCTGAATTCATACACCGTGGCATCTGACAGTGAACACACTGGGGAGGATAAGTCATCAACTTTTCCTGAAATTGGCATTGGAATTGACATTGGTACATCACAATGCAGTATTGCTGTGTGGAATGGATCTGAAGTGGAGCTTTTGAAGAACACAAGAGACCAGAAGATTATGAGATCATATGTGACTTTTAATGATGATACCCCTTCTGGAGGAGTTAAAAGTCAACTCTCTCATGAACATGACTTGTTATCCGGAGCTACAATCTTCAACATGAAACGCTTGATTGGAAGAGTTGATACAGACCCAGCTGTTCACTCTAGTAAAAATCTCCCATTTCTGGTACAGACCTTGGATATTGGTATACGTCCCTTTATTGCGGCACTGGTGAACAATGTGTGGAGATCCACCACGCCAGAAGAAGTCCTGGCTATTTTTCTACTGGAACTAAGAGAGATGGCTGAACCTCAGCTAAAACAACCAATAAGAAATGCAGTCCTCACAGTTCCGGTCTCATTCAATCGATTCCAGCTGACCCGAATTGAACGAGCTTGTGCTATGGCTGGCCTTCACATTCGCCAGCTGATGCCTGAACCAACTGCTGTGGCTTTATTATATGCGCAGCAGCAGCAGAGTTCTCATGACATGATGGGCAGCGGAAGCGAGAAGATTGCTCTAATTTTCAATATGGGTGCTGGCTATTGTGATGTCGCTGTGACATCTACAGCCGGAGGAGTATCACAGATAAAGGCATTGGCAGGAAGTACCATAGGGGGCGAAGACTTGCTTCAGAATACGATGCATTATCTGTTACCAGAATCTCAAACTCTATTCACGACCCGCGGTATCAAAGAAATCAAAACTATGGCCCTGCTCCGAGTTGCAACTCAGGACGCCATTCATAGGCTCTCCTCTCAAACTAGTGTGCATATTGATGTAGACTTGGGAGATGGATTGAAGCTAAACAGTTTAAACCGGAACGAGTTTGAGGAAGTGAAAAAGGTGTTTGAGAAGTGTGAAAACCTCATCATCCAGTGTTTGCAAGATGCCAGAGTAGAGGTTGAGGACGTAAGCGATGTGATAGTCGTTGGCGGATGCTCTTATATTCCGAAGGTAAAGAATCTTGTGACTAGCATGTTTAATGGAAAGGAACTTTACAAAGGGTTAAATCCTTTAGAAGCTGCGGTTCGGGGTGCAGCAGTTGAGGGAGCTGTGGGAAACTTGGACTTGCTAACTATCCAAACCGCACCTCTAGCTATAGGGATCAGAGCTGATGGGAACAACTTTGTCCCTTTGATACCAAGGAATACAACAATACCAGCAAGGAGGGACTTGGTTTTCACAACCTGTCATGATAATCAAACTGAGGCATTGATCATTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGCTGGGATATTTCAAAGTAGTTGGAATTCCTGAAGCACCTAAAGGAGTTCCGGAGATTAATGTGTGCATGGACATAAATGCAGCAAATGCACTGACAGTGTTAGTAGGTGTTGTAATGCCAGGGTCTCGGCAGTCGGTGATTCCGGTCATGGAAGTGAGGACAACTGTCGATGACGGCCATGGTTGGTGCGTTGAGGCCTTAAATAAGAAGTGTGGTGATACACAGGACTTGGTTACTGTCCAGAGGAAAGCATAA 1827 0.439 MDMFCRLRVVIRDGWNNLLKHRRSLNSKMFDCCFMMLHTKFMISPLSISEWLNSYTVASDSEHTGEDKSSTFPEIGIGIDIGTSQCSIAVWNGSEVELLKNTRDQKIMRSYVTFNDDTPSGGVKSQLSHEHDLLSGATIFNMKRLIGRVDTDPAVHSSKNLPFLVQTLDIGIRPFIAALVNNVWRSTTPEEVLAIFLLELREMAEPQLKQPIRNAVLTVPVSFNRFQLTRIERACAMAGLHIRQLMPEPTAVALLYAQQQQSSHDMMGSGSEKIALIFNMGAGYCDVAVTSTAGGVSQIKALAGSTIGGEDLLQNTMHYLLPESQTLFTTRGIKEIKTMALLRVATQDAIHRLSSQTSVHIDVDLGDGLKLNRXLNRNEFEEVNXKVFEKCENLIIQCLQDARVEVEDVSDVIVVGGCSYIPKVKNLVTSMFNGKELYKGLNPLEAAVRGAAVEGAVGNLDLLTIQTAPLAIGIRADGNNFVPLIPRNTTIPARRDLVFTTCHDNQTEALIIVYEGEEKKAEENHLLGYFKVVGIPEAPKGVPEINVCMDINAANALTVLVGVVMPGSRQSVIPVMEVRMXTVDDGHGWCVEALNKKCGDTQDLVTVQRKA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0488 611 Pfam Hsp70 protein 77 560 IPR013126 GO:0005524|GO:0140662
Prci4g0488 611 SUPERFAMILY Actin-like ATPase domain 272 456 IPR043129 -
Prci4g0488 611 SUPERFAMILY Actin-like ATPase domain 77 258 IPR043129 -
Prci4g0488 611 CDD HSP70_NBD 77 456 - -
Prci4g0488 611 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 455 583 IPR029047 -
Prci4g0488 611 FunFam Heat shock 70 kDa protein 8 309 390 - -
Prci4g0488 611 Gene3D - 261 438 - -
Prci4g0488 611 PRINTS 70kDa heat shock protein signature 409 425 - -
Prci4g0488 611 PRINTS 70kDa heat shock protein signature 542 558 - -
Prci4g0488 611 PRINTS 70kDa heat shock protein signature 75 88 - -
Prci4g0488 611 PRINTS 70kDa heat shock protein signature 215 235 - -
Prci4g0488 611 PRINTS 70kDa heat shock protein signature 441 461 - -
Prci4g0488 611 Gene3D - 77 454 - -
Prci4g0488 611 Gene3D - 140 195 - -
Prci4g0488 611 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 463 572 IPR029047 -
Prci4g0488 611 Gene3D Actin; Chain A, domain 4 308 390 - -
Prci4g0488 611 PANTHER HEAT SHOCK PROTEIN 70KDA 77 561 IPR013126 GO:0005524|GO:0140662
Prci4g0488 611 FunFam Heat shock 70 kDa protein 8 456 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0488 Prci-Chr4 3468280 3470483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0488 77 559 Calmodulin-binding Proteins AT3G12580 37.876 7.58e-102 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0488 K09489 - gmx:100809773 884.019