Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0459 ATGGAGTGCGACCACTTGCTTTCGAAGCGAGCTTCCCGCAGTGCCAGAGCCAATCACGACTATCTTCGGTCGAGAAGAGAGAGAACGAAGAAGATGGCAATTGTAGACAGCATTGCCAGTCTCTTTCTTCTCATCATGCTCATTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGTTCTCGTTCCTCCATCAAGGCTAATGAACTTGAGAGGCCTCTTGTCTTGGATGATGCAAATGTGGTGCATAGCCCAAATGGTGAGTTGCCAATAGATTATGATCTTGAGGGTGCATCAATCCCCAATGAAGGTCATTTTCGCCTGCCGCGACCCCCTGGACTCATTTATAAGCAAAGGCTTTCTGCTGCTTCTTGCAATATGCCTCAAGATGTAATTTCTGATCCTTCAGAAGATGTTGCTATCGGTCAGACACTTAAACTTTCCCCAGCCCAGTTGGCGGAGTTTCAGAAACATAACAGAAATTTTGAAACTGACAAACTGCAAGACTTTGTACAGAGAGATATATTGGATCAAAGAAGTTGCCTTACTCTAGAGGTCATCACTGGTCCTTCTTGTGGACTTCATTGTTCTGTACAGTCAACAATTCCCTCCAAGCTACCGCTGACCCTGGGAAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCATTAATAAACTGGAATTTAGAGAAAATGAAATGGGAGTTGGTAGATATGGGAAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAGCCCTTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAATTGAGCTTACCAATGGAGATATCATAACACTAGGAATGACTTCAAAAGTAATTGTTCATATTACTTCTCAAAATAAAATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGTGGGAAAAAGCTAGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGATTCAATAAGTTCGGACTGTTTGGCATTTGCGATGGGCATGGTGGAGATGGAGCTGCCAGAACTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAAAGAGAGAAAGTTGTATCATTCCGTAATGCTTCGAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCTTGAATCACTATTATGAGGGATGCACGGCAACAGTGCTTCTGGTTTGGGCTGATGGTAATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCGGCCTGTGTTATGAATGTTGATGGGGTAGAAATTAAGATGACGGAAGATCATAAGATAGCAAGTTATTCTGAAAGGCTACGAATCGAAGAAACAGGCGAACCTCTGAGGGATGGGGAAACACGTTTATATGGTATAAATCTTGCAAGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTTAGTTCAGAGCCTTACACAAGTCAAGTTGTGCACATGAATCAGGCTAGCAGGGCTTTTGCCATACTGGCAAGTGATGGGCTGTGGGATGTTATGAGCGGGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTCAACAGATGATGATAATTCAGCGGAAAAGATTGCAAGTTTTTTGTTGAGTGAGGCTAGAACACTCGGAACAAAGGATAACACCTCAGTAATTTTCTTAGATTTTGATGCCTTCCCCAAATTTTCTTGTAAAGATGAGTGTTAG 1791 0.4243 MECDHLLSKRASRSARANHDYLRSRRERTKKMAIVDSIASLFLLIMLILIIVLVFFACKPWRFLFSSRSRSSIKANELERPLVLDDANVVHSPNGELPIDYDLEGASIPNEGHFRLPRPPGLIYKQRLSAASCNMPQDVISDPSEDVAIGQTLKLSPAQLAEFQKHNRNFETDKLQDFVQRDILDQRSCLTLEVITGPSCGLHCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPISPLDPGSRQWSNPIELTNGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLPGFNKFGLFGICDGHGGDGAARTASKLFPEIVANILSDSLKREKVVSFRNASNVLRDAFSQTEACLNHYYEGCTATVLLVWADGNENFFAQCANVGDSACVMNVDGVEIKMTEDHKIASYSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYTSQVVHMNQASRAFAILASDGLWDVMSGKKAIQLVLQMREKYSTDDDNSAEKIASFLLSEARTLGTKDNTSVIFLDFDAFPKFSCKDEC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0459 596 PANTHER PROTEIN PHOSPHATASE 2C 306 581 IPR015655 GO:0004722|GO:0006470
Prci4g0459 596 SMART FHA_2 215 267 IPR000253 GO:0005515
Prci4g0459 596 Gene3D - 185 320 - -
Prci4g0459 596 CDD FHA_PP2C70-like 190 300 - -
Prci4g0459 596 Pfam FHA domain 217 292 IPR000253 GO:0005515
Prci4g0459 596 SUPERFAMILY SMAD/FHA domain 188 298 IPR008984 GO:0005515
Prci4g0459 596 SMART PP2C_4 306 582 IPR001932 -
Prci4g0459 596 Pfam Protein phosphatase 2C 323 577 IPR001932 -
Prci4g0459 596 FunFam Protein phosphatase 2C 70 185 319 - -
Prci4g0459 596 ProSiteProfiles Forkhead-associated (FHA) domain profile. 216 267 IPR000253 GO:0005515
Prci4g0459 596 ProSiteProfiles PPM-type phosphatase domain profile. 312 584 IPR001932 -
Prci4g0459 596 Gene3D - 321 593 IPR036457 -
Prci4g0459 596 CDD PP2Cc 324 584 IPR001932 -
Prci4g0459 596 SUPERFAMILY PP2C-like 325 586 IPR036457 -
Prci4g0459 596 FunFam Protein phosphatase 2C 70 320 591 - -
Prci4g0459 596 ProSitePatterns PPM-type phosphatase domain signature. 349 357 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0459 Prci-Chr4 3152510 3160663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0459 32 585 PP2C-type Phosphatase Gene Family AT5G19280 58.136 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0459 K01090 - qsa:O6P43_003406 791.571