Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0458 ATGGAGTGCGACCACTTGCTTTCGAAGCGAGCTTCCCGCAGTGCCAGAGCCAATCACGACTATCTTCGGTCGAGAAGAGAGAGAACGAAGAAGATGGCAATTGTAGACAGCATTGCCAGTCTCTTTCTTCTCATCATGCTCATTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGTTCTCGTTCCTCCATCAAGGCTAATGAACTTGAGAGGCCTCTTGTCTTGGATGATGCAAATGTGGTGCATAGCCCAAATGGTGAGTTGCCAATAGATTATGATCTTGAGGGTGCATCAATCCCCAATGAAGGTCATTTTCGCCTGCCGCGACCCCCTGGACTCATTTATAAGCAAAGGCTTTCTGCTGCTTCTTGCAATATGCCTCAAGAAGATGTTGCTATCGGTCAGACACTTAAACTTTCCCCAGCCCAGTTGGCGGAGTTTCAGAAACATAACAGAAATTTTGAAACTGACAAACTGCAAGACTTTGTACAGAGAGATATATTGGATCAAAGAAGTTGCCTTACTCTAGAGGTCATCACTGGTCCTTCTTGTGGACTTCATTGTTCTGTACAGTCAACAATTCCCTCCAAGCTACCGCTGACCCTGGGAAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCATTAATAAACTGGAATTTAGAGAAAATGAAATGGGAGTTGGTAGATATGGGAAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAGCCCTTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAATTGAGCTTACCAATGGAGATATCATAACACTAGGAATGACTTCAAAAGTAATTGTTCATATTACTTCTCAAAATAAAATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGTGGGAAAAAGCTAGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGATTCAATAAGTTCGGACTGTTTGGCATTTGCGATGGGCATGGTGGAGATGGAGCTGCCAGAACTGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAAAGAGAGAAAGTTGTATCATTCCGTAATGCTTCGAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCTTGAATCACTATTATGAGGGATGCACGGCAACAGTGCTTCTGGTTTGGGCTGATGGTAATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCGGCCTGTGTTATGAATGTTGATGGGGTAGAAATTAAGATGACGGAAGATCATAAGATAGCAAGTTATTCTGAAAGGCTACGAATCGAAGAAACAGGCGAACCTCTGAGGGATGGGGAAACACGTTTATATGGTATAAATCTTGCAAGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTTAGTTCAGAGCCTTACACAAGTCAAGTTGTGCACATGAATCAGGCTAGCAGGGCTTTTGCCATACTGGCAAGTGATGGGCTGTGGGATGTTATGAGCGGGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTCAACAGATGATGATAATTCAGCGGAAAAGATTGCAAGTTTTTTGTTGAGTGAGGCTAGAACACTCGGAACAAAGGATAACACCTCAGTAATTTTCTTAGATTTTGATGCCTTCCCCAAATTTTCTTGTAAAGATGAGTGTTAG 1770 0.4254 MECDHLLSKRASRSARANHDYLRSRRERTKKMAIVDSIASLFLLIMLILIIVLVFFACKPWRFLFSSRSRSSIKANELERPLVLDDANVVHSPNGELPIDYDLEGASIPNEGHFRLPRPPGLIYKQRLSAASCNMPQEDVAIGQTLKLSPAQLAEFQKHNRNFETDKLQDFVQRDILDQRSCLTLEVITGPSCGLHCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPISPLDPGSRQWSNPIELTNGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLPGFNKFGLFGICDGHGGDGAARTASKLFPEIVANILSDSLKREKVVSFRNASNVLRDAFSQTEACLNHYYEGCTATVLLVWADGNENFFAQCANVGDSACVMNVDGVEIKMTEDHKIASYSERLRIEETGEPLRDGETRLYGINLARMLGDKFLKQQDSRFSSEPYTSQVVHMNQASRAFAILASDGLWDVMSGKKAIQLVLQMREKYSTDDDNSAEKIASFLLSEARTLGTKDNTSVIFLDFDAFPKFSCKDEC 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0458 589 ProSitePatterns PPM-type phosphatase domain signature. 342 350 IPR000222 GO:0043169
Prci4g0458 589 PANTHER PROTEIN PHOSPHATASE 2C 299 574 IPR015655 GO:0004722|GO:0006470
Prci4g0458 589 CDD FHA_PP2C70-like 183 293 - -
Prci4g0458 589 Pfam Protein phosphatase 2C 316 570 IPR001932 -
Prci4g0458 589 SUPERFAMILY PP2C-like 318 579 IPR036457 -
Prci4g0458 589 SMART PP2C_4 299 575 IPR001932 -
Prci4g0458 589 Gene3D - 178 313 - -
Prci4g0458 589 CDD PP2Cc 317 577 IPR001932 -
Prci4g0458 589 FunFam Protein phosphatase 2C 70 313 584 - -
Prci4g0458 589 FunFam Protein phosphatase 2C 70 178 312 - -
Prci4g0458 589 ProSiteProfiles Forkhead-associated (FHA) domain profile. 209 260 IPR000253 GO:0005515
Prci4g0458 589 SMART FHA_2 208 260 IPR000253 GO:0005515
Prci4g0458 589 Pfam FHA domain 210 285 IPR000253 GO:0005515
Prci4g0458 589 SUPERFAMILY SMAD/FHA domain 181 291 IPR008984 GO:0005515
Prci4g0458 589 Gene3D - 314 586 IPR036457 -
Prci4g0458 589 ProSiteProfiles PPM-type phosphatase domain profile. 305 577 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0458 Prci-Chr4 3152508 3160663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0458 32 578 PP2C-type Phosphatase Gene Family AT5G19280 57.288 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0458 K01090 - qsa:O6P43_003406 781.171