Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0456 ATGCAAGAATTTCTGGGTTCAGTTCGCCGATCCTTGGTTTTCAGGAGCCCAGGCGGGGACGATGGAGGGTTTGGTGTTGGCGGTCTGGTTGATAAGATTGGCTCCAGCATTCGCAAATCACGAATCGGACTCTTCTCTCAGCCACGCGTTAGGGCTCTGCCACCGGTTCCCAAGGACAACACTCCTTCGATCCGGTGGCGGAAGGGCGAGTTGATTGGTTGTGGTGCCTTTGGTCGAGTGTATATGGGTATGAACCTTGATTCCGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCAGCAAGGGGTGCTTCGAAAGAGAAAACACAGGCTCATATATTGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAACATCCAAATATTGTTAGATATTTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATTCTGCTGGAATTTGTACCTGGAGGATCAATCTCATCACTCTTGGGGAAATTTGGGTCCTTCCCTGAGTCTGTGATAAAAATGTATACAAAGCAACTCTTACTGGGTCTTGAGTACCTTCACAAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATTAAACTTGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAATGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTGCAGACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTTGGATGCACTGTAATAGAGATGGCAACAGGGAAGCCTCCGTGGAGTGAACAGTTTCAGGAGGTTGCCGCTCTTTTCCATATAGGGACAACTAAATCCCACCCACCTATACCTGACCATCTTTCTGTTGAGGCAAAGGATTTTTTGTTAAATTGCTTGCAGAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTGTCACCTGCGAGTATCAAGAATCTAATCCCACATTATGCAGTTCAGTTGTGGAATCTTACAAGACGGTAACATCTGGGACAGACTCTAAAATCTCGGGAATAGGTCTCAAGGGTGTTTGTCAGATGGATAGCATAAGATGTTCATCTATGTCTCCTGAGACGCTTTTAAAATCAGATTTCTATCAAGGAACAAGCAATTATGATGATGACATGTGTCAAATAGATGACAAAGATGATCTTTTTGTTGGTGCATCAGTGAAGTCTAAATCTCGCATTTCATCAGATGATGTAAAGAGTTTCAACCCTATGTGTGAACCTATAGATGAATGGACATGCAATTTCGATAAAAGTCCAGATTTCGAGAAAAGGAGGACAAACTTGTCTCCTGACCAGACAATTAACAAGACAATGAGAAGAACTGAGGCATCTCAAAAGGTGGAGAATGAATTTTCATTTCCAAGTGAGCCTATAGGAGCTGATGACGATGAAGAAGTCACTGAGTCAAAAATTAGAGCTTTTCTAGATGAAAAGGCTCTGGAACTGAAGAAACTCCAAACTCCTCTTTATGAAGAATTCTTTAGCATATCGAATGCAGCTGTTCCTCCCATGCCTGTTTCAATTGCTGACAGTGAAGTAGTTTCAGAAATGTCAAATGTAACACCAAAAAGCAGGTCGCCTGGTCAGGCTAGCAGACGATACTCAGTGGCTGATGGTGCTCATTTTGCAAGGCATGGAAGTCATAACAAAAATCAATCTAAAGCTAGTGGTGCAAATAGTCGGCCTTTGCAGGAAATCCACCCATCTGAGCTCAACGAATGGAAAGAGACACTTAACAATGCTAAGTTGGAATCATTGAGTGCTAGTTCGACTTTCTCAGAGATACAAAGGAAATGGAAAGAAGAACTTGTTGAAGAGCTTGAGAGGAAGCGAGAGATGATGCGTCTGTCAGGCTTGGGAGGGAAGATTACATCCCCAACTGATCGCAATTTTCGTAAATTGGCTGATAGATCACGCTTCGCATTTCCAAGCTAG 2013 0.4297 MQEFLGSVRRSLVFRSPGGDDGGFGVGGLVDKIGSSIRKSRIGLFSQPRVRALPPVPKDNTPSIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAARGASKEKTQAHILELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSVEAKDFLLNCLQKEPDLRPSASDLLQHPFVTCEYQESNPTLCSSVVESYKTVTSGTDSKISGIGLKGVCQMDSIRCSSMSPETLLKSDFYQGTSNYDDDMCQIDDKDDLFVGASVKSKSRISSDDVKSFNPMCEPIDEWTCNFDKSPDFEKRRTNLSPDQTINKTMRRTEASQKVENEFSFPSEPIGADDDEEVTESKIRAFLDEKALELKKLQTPLYEEFFSISNAAVPPMPVSIADSEVVSEMSNVTPKSRSPGQASRRYSVADGAHFARHGSHNKNQSKASGANSRPLQEIHPSELNEWKETLNNAKLESLSASSTFSEIQRKWKEELVEELERKREMMRLSGLGGKITSPTDRNFRKLADRSRFAFPS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0456 670 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 338 - -
Prci4g0456 670 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Prci4g0456 670 Coils Coil 106 126 - -
Prci4g0456 670 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Prci4g0456 670 MobiDBLite consensus disorder prediction 464 490 - -
Prci4g0456 670 MobiDBLite consensus disorder prediction 575 589 - -
Prci4g0456 670 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0456 670 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0456 670 CDD STKc_MAPKKK 65 328 - -
Prci4g0456 670 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Prci4g0456 670 Gene3D Transferase(Phosphotransferase) domain 1 65 358 - -
Prci4g0456 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Prci4g0456 670 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0456 670 FunFam Mitogen-activated protein kinase kinase kinase 2 65 356 - -
Prci4g0456 670 MobiDBLite consensus disorder prediction 569 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0456 Prci-Chr4 3113557 3119615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0456 1 648 MAP Kinase Kinase Kinase AT3G06030 59.009 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci4g0456 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0456 K20606 - cave:132182886 871.307