Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0451 ATGGATGCTCTTTCACCTGCAAAGCTTCTTCCCATTTCCTTGGAGAAGCTAACTCCTACTTGTTTTCTTTCTTACTCGCAAAATCATAACTTCAATTTTTTCTTTTCCATGTATCACTCCAACCCTGGTCTACGCCTTATCTCCAAGTTCAGAACTCCACAATCCCTTTTAAATACCTCTTCCTTGGTCCACGCAGCAGTTGATAAAGTTGGTTCTCCCACGTTAAGGGAAATATGCGAAGCTCGTGTTCCCCAGCATATATTAGACAGGATGGAGGAGATTGGATATGTATTGCCTACAGATGTCCAGAAACAAGCATTGCCTTCTCTTTTATCTGGTCGTGATTGTATCCTTCACGCTCAGACAGGTTCTGGGAAGACACTTGCATACCTGCTTCTTATATATTCCATAGTAAATACTGCAAAATCTGTTGTGCAAGCTCTTGTTGTGGTTCCCACCCGTGAACTTGGCATGCAGGTTGCTAAAGTTGCTAGGATATTGGTGGCAACTCCAACAGAGGTTGAGGAGGAGCACAATTCATGTACTGTCATGGCTCTTTTGGATGGCGGAACATTGAGAAGACACAAGAGTTGGCTAAAGGTTGACTTTATTTTCAATTCTTCAACGCAAGTCAGTTCCCTTCGAAAGCTTTTAACTTTGTATTCATCATGCAATAACCGTCAAACGGTTTTTGCCAGTGCATCTATACCACAACACAGACGATTTCTTCATGATTGTGTGCAACAGAAATGGACTAAGAATGATGTGGTCCATATTCATGTCAGCCCAGTTGAGCCAATGCCATCACGCCTGCATCATAGATTTGTAGTATGTCACAGGAACAAGAAGCAACAAACCCTGTTATCTTTGATACAATATGATGCACCTAATTCTGGCATTATATTTGCTAATGAGCAGTCTGAGAAGTCAAAACGGGCAGGAAATGCTTCATCGACATCCCTTCTGATTGACTTTCTGAAGACTTCATATCAAGGTTCTTTAGATATCCTCCTCCTTGAGGAAGACATGAATTTCTATTCAAGAGCAGTTTCACTGTTGGAGGTAAGGAAAGGTGTCGGCTATCTTCTTGTAGCAACAGATATAGCTTCGAGAGGAGTTGACCTTCCAGAAATGTCTCACATTTACAACTTTGACCTGCCTAGGACTGCCATAGATTATCTTCATCGGGCAGGTAGGACTTGTAGGAAACCCTTTTCTGACATGAAATGTACTGTTACCTCTATTATCGTTCCAGAGGAGCGGTTTGTTCTACAGAAGTATGAAAATGAGCTCATGTTCAATTGTGAAGAGCTTACTTTGTAA 1323 0.4165 MDALSPAKLLPISLEKLTPTCFLSYSQNHNFNFFFSMYHSNPGLRLISKFRTPQSLLNTSSLVHAAVDKVGSPTLREICEARVPQHILDRMEEIGYVLPTDVQKQALPSLLSGRDCILHAQTGSGKTLAYLLLIYSIVNTAKSVVQALVVVPTRELGMQVAKVARILVATPTEVEEEHNSCTVMALLDGGTLRRHKSWLKVDFIFNSSTQVSSLRKLLTLYSSCNNRQTVFASASIPQHRRFLHDCVQQKWTKNDVVHIHVSPVEPMPSRLHHRFVVCHRNKKQQTLLSLIQYDAPNSGIIFANEQSEKSKRAGNASSTSLLIDFLKTSYQGSLDILLLEEDMNFYSRAVSLLEVRKGVGYLLVATDIASRGVDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDMKCTVTSIIVPEERFVLQKYENELMFNCEELTL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0451 440 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 107 254 IPR014001 -
Prci4g0451 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 402 IPR027417 -
Prci4g0451 440 CDD SF2_C_DEAD 271 402 - -
Prci4g0451 440 SMART helicmild6 320 404 IPR001650 -
Prci4g0451 440 Gene3D - 267 438 IPR027417 -
Prci4g0451 440 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 223 431 - -
Prci4g0451 440 SMART ultradead3 95 274 IPR014001 -
Prci4g0451 440 Pfam DEAD/DEAH box helicase 100 204 IPR011545 GO:0003676|GO:0005524
Prci4g0451 440 Pfam Helicase conserved C-terminal domain 285 402 IPR001650 -
Prci4g0451 440 Gene3D - 68 210 IPR027417 -
Prci4g0451 440 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 283 440 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0451 Prci-Chr4 3085291 3093653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0451 83 402 Eukaryotic Initiation Factors Gene Family AT3G19760 24.928 1.65e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0451 - - gmx:100786205 610.527