Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0449 ATGGATGCTCTTTCACCTGCAAAGCTTCTTCCCATTTCCTTGGAGAAGCTAACTCCTACTTGTTTTCTTTCTTACTCGCAAAATCATAACTTCAATTTTTTCTTTTCCATGTATCACTCCAACCCTGGTCTACGCCTTATCTCCAAGTTCAGAACTCCACAATCCCTTTTAAATACCTCTTCCTTGGTCCACGCAGCAGTTGATAAAGTTGGTTCTCCCACGTTAAGGGAAATATGCGAAGCTCGTGTTCCCCAGCATATATTAGACAGGATGGAGGAGATTGGATATGTATTGCCTACAGATGTCCAGAAACAAGCATTGCCTTCTCTTTTATCTGGTCGTGATTGTATCCTTCACGCTCAGACAGGTTCTGGGAAGACACTTGCATACCTGCTTCTTATATATTCCATAGTAAATACTGCAAAATCTGTTGTGCAAGCTCTTGTTGTGGTTCCCACCCGTGAACTTGGCATGCAGGTTGCTAAAGTTGCTAGGATATTGGTGGCAACTCCAACAGAGGTTGAGGAGGAGCACAATTCATGTACTGTCATGGCTCTTTTGGATGGCGGAACATTGAGAAGACACAAGAGTTGGCTAAAGGCAGAGCCTCCGATGATAGTGGTAGCAACAGTGGGGAGTTTATGCCACATTATTGAAAGACAATTTCTTAAGCTTGAAACTGTGCGGGTGCTAGTAGTTGATGAGGTTGACTTTATTTTCAATTCTTCAACGCAAGTCAGTTCCCTTCGAAAGCTTTTAACTTTGTATTCATCATGCAATAACCGTCAAACGGTTTTTGCCAGTGCATCTATACCACAACACAGACGATTTCTTCATGATTGTGTGCAACAGAAATGGACTAAGAATGATGTGGTCCATATTCATGTCAGCCCAGTTGAGCCAATGCCATCACGCCTGCATCATAGATTTGTAGTATGTCACAGGAACAAGAAGCAACAAACCCTGTTATCTTTGATACAATATGATGCACCTAATTCTGGCATTATATTTGCTAATGAGCAGTCTGAGAAGTCAAAACGGGCAGGAAATGCTTCATCGACATCCCTTCTGATTGACTTTCTGAAGACTTCATATCAAGGTTCTTTAGATATCCTCCTCCTTGAGGAAGACATGAATTTCTATTCAAGAGCAGTTTCACTGTTGGTTGGTAGAAATGACTTATAA 1185 0.4169 MDALSPAKLLPISLEKLTPTCFLSYSQNHNFNFFFSMYHSNPGLRLISKFRTPQSLLNTSSLVHAAVDKVGSPTLREICEARVPQHILDRMEEIGYVLPTDVQKQALPSLLSGRDCILHAQTGSGKTLAYLLLIYSIVNTAKSVVQALVVVPTRELGMQVAKVARILVATPTEVEEEHNSCTVMALLDGGTLRRHKSWLKAEPPMIVVATVGSLCHIIERQFLKLETVRVLVVDEVDFIFNSSTQVSSLRKLLTLYSSCNNRQTVFASASIPQHRRFLHDCVQQKWTKNDVVHIHVSPVEPMPSRLHHRFVVCHRNKKQQTLLSLIQYDAPNSGIIFANEQSEKSKRAGNASSTSLLIDFLKTSYQGSLDILLLEEDMNFYSRAVSLLVGRNDL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0449 394 CDD DEADc 87 282 - -
Prci4g0449 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 275 IPR027417 -
Prci4g0449 394 Gene3D - 55 287 IPR027417 -
Prci4g0449 394 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 107 289 IPR014001 -
Prci4g0449 394 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 75 343 - -
Prci4g0449 394 SMART ultradead3 95 309 IPR014001 -
Prci4g0449 394 Pfam DEAD/DEAH box helicase 100 273 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0449 Prci-Chr4 3085290 3093466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0449 83 237 Eukaryotic Initiation Factors Gene Family AT3G19760 29.677 1.05e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0449 - - qsa:O6P43_003412 522.702