Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0435 ATGCCCAATTCTAAGCAACAATATATTCTGGTGAACAACTATACTCTCCACAGCTCACCTATCAAACTTGACCTGAATTATGTTCGCATGGCCGTGGCAGAAATGGTGGGTACTTTCATTCTGATGTTCTGTGTGTGTGGAATCATTGCAAGCACACAATTGCAAAATGGACAAGTAGGCCTCCTAGAGTATGCAGCTACAGCAGGATTAACAGTTATTGTGGCAATCTTCTCAATAGGGCCAATCTCTTGTGCCCACGTTAACCCAGCTGCCACAATAGCTTTTGCAACATTCGGTCAATTTCCATGGTTGAAGGTTCCAATTTATATACTCGCCCAAACAATGGGTTCTGTGTTGGCAACATATATTGGTAGCCTCGTCTATGGCATTAGATCAGATGCCATGATGACAAGGCCAATCCAAGGACCTATCTCTACCTTTTGGGTGGAGCTTATTGCAACTTTCATCATAATGTTCCTGGTTGCAGCCTTGACAAGTGAACTTCAATCAGTGGGTCATTTATCTGGTTTTGTTGTTGGAATAGCTATTGGACTTGCAGTGTTGATCACCGGACCTGTTTCAGGGGGATCAATGAATCCTGCAAGATCATTAGGCCCAGCAATTCTGTCATGGAAATTCAAGGACATATGGATATACATCACAGCCCCCATAAGTGGAGATGTAGCAGGTGTTCTATTGTTTCGTTTTCTGCGTCTCAAACACCAACCTTGCACTACTTTTTCCTCCCCAAGCACAACTCACGATGACCATTCCACAACCTTGTACCCAAGCTAG 795 0.4377 MPNSKQQYILVNNYTLHSSPIKLDLNYVRMAVAEMVGTFILMFCVCGIIASTQLQNGQVGLLEYAATAGLTVIVAIFSIGPISCAHVNPAATIAFATFGQFPWLKVPIYILAQTMGSVLATYIGSLVYGIRSDAMMTRPIQGPISTFWVELIATFIIMFLVAALTSELQSVGHLSGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKDIWIYITAPISGDVAGVLLFRFLRLKHQPCTTFSSPSTTHDDHSTTLYPS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0435 264 Gene3D Glycerol uptake facilitator protein. 6 247 IPR023271 -
Prci4g0435 264 Pfam Major intrinsic protein 27 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 105 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 68 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci4g0435 264 SUPERFAMILY Aquaporin-like 25 244 IPR023271 -
Prci4g0435 264 PANTHER AQUAPORIN NIP2-1 21 246 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0435 Prci-Chr4 3037914 3039772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0435 32 243 Major Intrinsic Protein MIP AT5G37820 40.845 6.16e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0435 K09874 - qsa:O6P43_021616 363.999