Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0419 ATGCCAGATTTTGCGATTTGTGATAAGAAAACTAAGCAGAAGAGCAATCTCAGCAGACTCAGTATGGATGAAGTTAATGAAACGTTGAAGAAACAAATGGCAGCACTTTTGCGGGTTATCTCTGCAGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCTAACAAGCAAGCACTTAAAAACTTGAATGTTACTCATGTTTTAACTGTGGCTAATACTCTGACACCCGCACATCCTAATGATTTTGTATATAAAACCATCAGTGTTGTTGACAGAGATGATGCAGACATAAAACAATACTTCAGTGAGTGTTTTGATTTTATTGATGAAGGCAAAAGACTTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAGATCCAGAAGTGTGACTATAGTGGTCGCATATCTGATGAAGACTCATCGAATGAGTTTATCTCAAGCCTTGGAGCATGTGAAGAGCAGACGACCAACAGCATCTCCCAACCTTGGTTTCATTCGACAGCTGGAGGACTTTGAAAAATCTCTTCAAGGTGCGAATTGA 582 0.4038 MPDFAICDKKTKQKSNLSRLSMDEVNETLKKQMAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKQALKNLNVTHVLTVANTLTPAHPNDFVYKTISVVDRDDADIKQYFSECFDFIDEGKRLGGTLVHCFAGRSRSVTIVVAYLMKTHRMSLSQALEHVKSRRPTASPNLGFIRQLEDFEKSLQGAN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0419 193 SMART dsp_5 51 188 IPR020422 GO:0006470|GO:0008138
Prci4g0419 193 FunFam Dual specificity phosphatase 12 53 193 - -
Prci4g0419 193 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 113 170 IPR000387 GO:0016311|GO:0016791
Prci4g0419 193 ProSiteProfiles Dual specificity protein phosphatase domain profile. 51 191 IPR020422 GO:0006470|GO:0008138
Prci4g0419 193 CDD DSP 52 184 - -
Prci4g0419 193 Pfam Dual specificity phosphatase, catalytic domain 59 187 IPR000340 GO:0008138|GO:0016311
Prci4g0419 193 Gene3D Protein tyrosine phosphatase superfamily 44 193 IPR029021 -
Prci4g0419 193 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 191 IPR029021 -
Prci4g0419 193 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 32 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0419 Prci-Chr4 3006485 3009633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0419 54 191 Protein tyrosine phosphatase (PTP) family AT3G06110 61.151 6.59e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0419 - - pcin:129310161 381.333