Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0418 ATGGATGAAGTTAATGAAACGTTGAAGAAACAAATGGCAGCACTTTTGCGGGTTATCTCTGCAGCTAATTACTATAAACAGGATAATGTTCCTTGCCAAATCGAAGAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCTAACAAGCAAGCACTTAAAAACTTGAATGTTACTCATGTTTTAACTGTGGCTAATACTCTGACACCCGCACATCCTAATGATTTTGTATATAAAACCATCAGTGTTGTTGACAGAGATGATGCAGACATAAAACAATACTTCAGTGAGTGTTTTGATTTTATTGATGAAGGCAAAAGACTTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAGATCCAGAAGGAAGCTTGTAGCAGCATTTCACCGTTCCTGTTTTCAATATACAATTCACAATGTGACTATAGTGGTCGCATATCTGATGAAGACTCATCGAATGAGTTTATCTCAAGCCTTGGAGCATGTGAAGAGCAGACGACCAACAGCATCTCCCAACCTTGGTTTCATTCGACAGCTGGAGGACTTTGAAAAATCTCTTCAAGGTGCGAATTGA 570 0.4018 MDEVNETLKKQMAALLRVISAANYYKQDNVPCQIEEGLFLGSVGAAANKQALKNLNVTHVLTVANTLTPAHPNDFVYKTISVVDRDDADIKQYFSECFDFIDEGKRLGGTLVHCFAGRSRRKLVAAFHRSCFQYTIHNVTIVVAYLMKTHRMSLSQALEHVKSRRPTASPNLGFIRQLEDFEKSLQGAN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0418 189 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 187 IPR020422 GO:0006470|GO:0008138
Prci4g0418 189 SMART dsp_5 30 184 IPR020422 GO:0006470|GO:0008138
Prci4g0418 189 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 28 185 - -
Prci4g0418 189 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 92 166 IPR000387 GO:0016311|GO:0016791
Prci4g0418 189 Gene3D Protein tyrosine phosphatase superfamily 23 189 IPR029021 -
Prci4g0418 189 CDD DSP 31 180 - -
Prci4g0418 189 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 187 IPR029021 -
Prci4g0418 189 Pfam Dual specificity phosphatase, catalytic domain 140 183 IPR000340 GO:0008138|GO:0016311
Prci4g0418 189 Pfam Dual specificity phosphatase, catalytic domain 38 124 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0418 Prci-Chr4 3006485 3009790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0418 33 187 Protein tyrosine phosphatase (PTP) family AT3G06110 53.846 6.20e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0418 - - pcin:129310161 327.791