Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0407 ATGAATATCGTCTCGCTTTCTGTCTGCCGACACGTACCGCCCTCGGTCAATTTCCAGAGAGGACTCGCCATGGAGCCTTTCTTTCACCACCCGCGTAAAGACAAGGCCGTCGTCATACTCGGCGCCACCGGCACTGGCAAGTCCAGGCTGGCCATCGACCTCGCCTCCTGCTTCCCTCCGGCCGAGATCGTCAACTCCGACAAAATGCAAGTCTACCGGGGCCTCGACATCACCACCAACAAGGTCAGCGAAGAAGAATGTCGCGGCGTCCCGCACCACCTCCTCGGAATCGCCGATCCCGATTCAAATTTCACCGCCAAGGACTTCACCCGCCACGCCTCCTCCGCCATTGATTCCATCGTCCGCCGAGATTGCCTCCCCATCATCGCCGGCGGCTCTAATTCCTATATTGAAGCCCTCGTCGAGGACGACTCTGCGTTTCGGTTGAAGTACGAGTGCTGCTTTCTCTGGGTGGACGTCTCTCTGCCCGTCCTCGATCCATTCCTCTCGAGGCGGGTCGACCGGATGATCGAAGCGGGTCAGGTCGATGAGGTCCGTCAGTTTTTCGACCCGGCAGGAGACTACACGGCCGGAATCAGAAGAGCCATTGGACTGCCTGAGTTTGATGAATTTCTCAGAACAGAGGCCACGGTCGATGAAGGGACCAAGAGGAGGTCACTAGACGCTGCCATTGCGAAGATTAAATCCAACAATTGCTCGCTGGCTCGTCGCCAGCTTCAGAAGATTCATCGGCTTTACAACATGTGGAAGCGAAATATGTACCGCCTCGACGCCACCGAGGCGTTCAAAAAATTCGGGGACGAGGCAGAGGAACTATGGGAGACTAGCGTGCTTGCCAGGAGCCAGAGGATTGTACACAAGTTCCTCTACGACGACAGTCCGGTGGTTCCGACAGCCTCAGTAATGTCCTCGGTGCCACCGTATCAGCAGCCGAAGCAGGTGGCGATGGCTACTGCCTGTCATTAG 987 0.5694 MNIVSLSVCRHVPPSVNFQRGLAMEPFFHHPRKDKAVVILGATGTGKSRLAIDLASCFPPAEIVNSDKMQVYRGLDITTNKVSEEECRGVPHHLLGIADPDSNFTAKDFTRHASSAIDSIVRRDCLPIIAGGSNSYIEALVEDDSAFRLKYECCFLWVDVSLPVLDPFLSRRVDRMIEAGQVDEVRQFFDPAGDYTAGIRRAIGLPEFDEFLRTEATVDEGTKRRSLDAAIAKIKSNNCSLARRQLQKIHRLYNMWKRNMYRLDATEAFKKFGDEAEELWETSVLARSQRIVHKFLYDDSPVVPTASVMSSVPPYQQPKQVAMATACH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0407 328 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Prci4g0407 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
Prci4g0407 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Prci4g0407 328 Gene3D - 33 296 IPR027417 -
Prci4g0407 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 296 IPR039657 -
Prci4g0407 328 Pfam IPP transferase 150 247 - -
Prci4g0407 328 Pfam IPP transferase 70 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0407 Prci-Chr4 2888173 2890356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0407 150 296 C2H2 Transcription Factor Family AT2G27760 29.310 1.96e-16 77.8