Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0376 ATGATTGTAGGGGAACACCTTGTAGGTACGAAACTGGCAATGAATAATGCCAGTGGAGAGCAGGAAAGGGAACTTGCCCATGAACCATACATTGGGTTAGAGTTTGAATCAGCAGACGATGCACTTAAGTTTTACACTTTATATGCAAAGCATGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATGGGTCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATGTCAGCTCAGTTCAAGAACGGGTTGTCCAGCATATATAAGGGTACAAAAGCGTGATTCAGGGAAGTGGGTTGTTGATCATTTCATTAAGGGCCACAATCATGAACTTGAACCCGAAGGTGAGGGTGAAAGTTGCCTTCCTAATTTGCAGCAGAAAGATGCTACAGGTGTAAAATCTGTAACTGAGGTGTCTCATAGACCAAGAAAAAAAATGCTTCAAGTCAAGGATGAGCATTGTTCCTTTGGCATAATTAATTTTAAGCGGATGAGAAAAGGAGATGAAGGAACATCCAGAGCTGAGCCATATGTAGGTCAAGAATTCAGTTCATCTAATGATGCTTACCAATCTTATCAGACATATGCAGCATCCGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGTTCTAAAAATGATGGATTAATTACATCCCGACGATTTGTGTGCTCAAAAGAGGGATTCCAACACCCTTCAAGAGTTGGTTGTGGTGCTTATTTGAGAGTTAAGAGACAACCATCTGGGAAGTGGGTTGTGGATCGTCTTCATAAAGAGCATAATCATAATCTTGATCCTGAACAGGAGGGTAAGCCAAAAAGTCTGCCTGCTTTAAATATTTTGACTGATGAGGTTGATGCAGGATTGGTAAATGGTGACTTATTTAGGATAGATAACTACCCTGTTCCTAGGGCAGGCAGACAAAACCATATTAAAAGTGATTGGTACAACATGCTTTTTGAGTATTTTCAATCAAGACAAGCTGAAGATACAGGATTTTTTTATGCCATGGAAGTTGATAATGGCAATTGTATGAGCATATTTTGGGCTGACGGCAGATCAAGGTATTCAGGCAGTCAGTTTGGTGATCTCCTTGTTTTGGATACATCATATCGGAAAAGTGTTTATTTGGTGCCGTTTGCTACTTTTGTTGGCATTAACCATCACAAGCAACCTGTGCTTCTTGGATGCGCTCTAATTGCTGATGAATCTGAAGATTCTTTCACTTGGTTGTTTCAAACATGGATGAGGGCAATGTCTGGCCGGCAGCCACTGTCAGTAATAGCGGATCAAGACATTACAATCCAGAAGGCATTGACAAAAGTCTTTCCAGGAACCCGTCATCGTTTCTCATTGTGGCAAATTAAAGTAAAAGAACAAGAGAATGTGGGTTTGATGGGTAATAAGTTTACATATGATTATGAGAGGTGCATTTACCAAAGTCAGACAGTTGAAGAATTTGACACGACATGGAATGCCCTAATTAACAAATATGGATTAGAGAGCAATGCTTGGCTGAAGGAAATGTATGAGAAGCGTGCATCTTGGGTTCCATTATATTTGAAGGGGACCTTTTTTGCAGGCATTCATATGAATGAAAGTGTTGATTCGTTCTTTGGTACACTTTTAAATGGCCAAACCCCTCTGATGGAGTTCATTTCACGGTATGAAAGAGGTCTGGAGCGACGCCGTGAGGAAGAAAGAAAAGAGGATTTTAATACCTCCAATTTTCAACCATTTTTGCAAACGAAAGAATCAGTAGAAGATCAATGTAGAAGGGTTTATACTCTTACCATATTCAAAATATTTCAAAAAGAGCTTCTGCAATCCTACAGTTATCTAGGGTTTAAAATTTATGAAGAGGGGGTCCTCAGCAGATATTTGGTGCGTAAGTGTGGGAATGATCCTGAGAAGCATGTAGTTACCTTTAGTGCATCCAGTATCAGTGTAAGCTGTAGCTGTCAGATGTTTGAACATGAAGGCATTCTTTGCAGACATGTTCTAAGGGTTTTCCAAATTTTGGAATTAAGAGAAGTTCCGTCTCGTTATATCTTACACCGTTGGACTAGAAATGCCGAGAATGGTGTTTTTCCTGATGCAGAATCGTGGAGCAGCCCTCAGGAACTCAGGAATTTGATGCTATGGAGCCTAAGAGAAACTGCGTGTAAATATATAGATGCTGGTGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAGGGGGGGAGGAAGCTATGTTGGCATCGGTGA 2280 0.4057 MIVGEHLVGTKLAMNNASGEQERELAHEPYIGLEFESADDALKFYTLYAKHAGFKVRIGQLYRSRTDGSVSSRRFVCSKEGCQLSSRTGCPAYIRVQKRDSGKWVVDHFIKGHNHELEPEGEGESCLPNLQQKDATGVKSVTEVSHRPRKKMLQVKDEHCSFGIINFKRMRKGDEGTSRAEPYVGQEFSSSNDAYQSYQTYAASVGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLHKEHNHNLDPEQEGKPKSLPALNILTDEVDAGLVNGDLFRIDNYPVPRAGRQNHIKSDWYNMLFEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSGSQFGDLLVLDTSYRKSVYLVPFATFVGINHHKQPVLLGCALIADESEDSFTWLFQTWMRAMSGRQPLSVIADQDITIQKALTKVFPGTRHRFSLWQIKVKEQENVGLMGNKFTYDYERCIYQSQTVEEFDTTWNALINKYGLESNAWLKEMYEKRASWVPLYLKGTFFAGIHMNESVDSFFGTLLNGQTPLMEFISRYERGLERRREEERKEDFNTSNFQPFLQTKESVEDQCRRVYTLTIFKIFQKELLQSYSYLGFKIYEEGVLSRYLVRKCGNDPEKHVVTFSASSISVSCSCQMFEHEGILCRHVLRVFQILELREVPSRYILHRWTRNAENGVFPDAESWSSPQELRNLMLWSLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0376 759 SMART 26again6 656 683 IPR006564 GO:0008270
Prci4g0376 759 Pfam SWIM zinc finger 657 678 IPR007527 GO:0008270
Prci4g0376 759 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Prci4g0376 759 Pfam FAR1 DNA-binding domain 198 271 IPR004330 -
Prci4g0376 759 ProSiteProfiles Zinc finger SWIM-type profile. 645 681 IPR007527 GO:0008270
Prci4g0376 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 130 IPR031052 GO:0006355
Prci4g0376 759 Pfam MULE transposase domain 371 462 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0376 Prci-Chr4 2722536 2725861 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci4g0376 MULE 4.7e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0376 - - vra:111242705 1224.54